CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18030_001	Banana	cytosol	66.29	58.72
VIT_02s0012g03060.t01	Wine grape	cytosol	14.77	55.71
Solyc12g040580.1.1	Tomato	cytosol	28.41	54.35
Zm00001d042184_P001	Maize	plastid	88.64	48.75
TraesCS7A01G033600.1	Wheat	peroxisome	32.95	48.07
OQU75707	Sorghum	mitochondrion	87.5	48.02
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	86.36	47.5
Bra023725.1-P	Field mustard	cytosol	23.86	46.67
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	82.95	45.72
TraesCS7A01G012000.1	Wheat	mitochondrion	82.95	45.72
TraesCS3B01G565200.1	Wheat	golgi	82.58	45.51
HORVU7Hr1G006160.4	Barley	peroxisome	82.95	44.24
TraesCS3D01G491400.1	Wheat	peroxisome	82.95	44.24
KRH45161	Soybean	endoplasmic reticulum	81.06	44.03
KRH01445	Soybean	nucleus	80.3	43.62
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	82.95	43.45
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.55	43.3
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.17	43.09
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.17	43.0
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.79	42.8
Bra039172.1-P	Field mustard	mitochondrion	78.79	42.62
KRG93756	Soybean	plastid	80.3	39.48
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	67.8	38.58
EES08484	Sorghum	plastid	65.53	34.33
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.79	31.25
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	13.64	16.74
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	5.3	9.09

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:35.1
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGD_dom2	UniProt:A0A1B6Q846	GO:GO:0003674	GO:GO:0003824
GO:GO:0004616	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013328	EnsemblPlants:KXG34080	ProteinID:KXG34080	ProteinID:KXG34080.1
PFAM:PF00393	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	SMART:SM01350	EnsemblPlantsGene:SORBI_3003G418600	SUPFAM:SSF48179
UniParc:UPI00081AD541	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:72425488..72426484

Molecular Weight (calculated)

29420.0 Da

IEP (calculated)

5.159

GRAVY (calculated)

-0.273

Length

264 amino acids

Sequence
(BLAST)

001: MLRDTRNGPS LMLGGSFEAY KYIEDIFLKV AAQVPNSGPC VTYIGKGGSD NFVKMVHNGT EYGNMQLIAE DTIELQQVFS EWNKGELLSF LIEITTDIFG
101: IKDEQGEGYL VDKVLDKTGM KGTGKWTVQQ AAELSVAAPT IEASGLGLQA QLNEDVRQAL YASKICSYAN PNLANLLVDP EFAQEIMDRQ AAWRRVVCLA
201: INNGVSTRGM SASLAYFDSN HRDRLPANLV QAQRDYFRAH TYERVDMPGS FHTEWFKIAR NSKI

Best Arabidopsis Sequence Match ( AT3G02360.1 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.