Factsheet for VIT_02s0012g03060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0013g01670.t01	Wine grape	extracellular	48.57	25.37
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	51.43	16.74
KXG34080	Sorghum	peroxisome	55.71	14.77
Zm00001d042184_P001	Maize	plastid	77.14	11.25
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	77.14	11.25
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	74.29	11.21
OQU75707	Sorghum	mitochondrion	75.71	11.02
VIT_01s0010g01130.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.57	11.0
KRH01445	Soybean	nucleus	75.71	10.91
KRH45161	Soybean	endoplasmic reticulum	75.71	10.91
TraesCS3B01G565200.1	Wheat	golgi	74.29	10.86
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	74.29	10.86
TraesCS7A01G012000.1	Wheat	mitochondrion	74.29	10.86
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.71	10.73
TraesCS3D01G491400.1	Wheat	peroxisome	74.29	10.51
Zm00001d035925_P001	Maize	cytosol, mitochondrion	74.29	10.36
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	74.29	10.32
KRG93756	Soybean	plastid	77.14	10.06
HORVU7Hr1G006070.1	Barley	cytosol	11.43	9.64
TraesCS7A01G033600.1	Wheat	peroxisome	10.0	3.87
GSMUA_Achr2P18030_001	Banana	cytosol	12.86	3.02
Solyc12g040580.1.1	Tomato	cytosol	1.43	0.72
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

Gene3D:1.10.1040.10	Gene3D:3.40.50.720	MapMan:35.1	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2
ProteinID:CCB57815	ProteinID:CCB57815.1	UniProt:F6HT05	EMBL:FN596247	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03446	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	SUPFAM:SSF48179	SUPFAM:SSF51735	UniParc:UPI00021096B9	ArrayExpress:VIT_02s0012g03060	EnsemblPlantsGene:VIT_02s0012g03060
EnsemblPlants:VIT_02s0012g03060.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:11598058..11598462

Molecular Weight (calculated)

7311.6 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.476

Length

70 amino acids

Sequence
(BLAST)

1: MGVSGDEEGA RHGPSLTPGG SSKAHKNIED ILLKRAAQVS DNSFGVTYIG RGGSGNFIKM VQNGIEYGDM

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.