Factsheet for Zm00001d035925_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75707	Sorghum	mitochondrion	93.03	97.09
Zm00001d042184_P001	Maize	plastid	91.24	95.42
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	89.84	93.96
TraesCS7A01G012000.1	Wheat	mitochondrion	87.65	91.86
TraesCS3B01G565200.1	Wheat	golgi	87.45	91.65
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	87.45	91.65
HORVU7Hr1G006160.4	Barley	peroxisome	87.85	89.09
TraesCS3D01G491400.1	Wheat	peroxisome	87.85	89.09
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	87.85	87.5
GSMUA_Achr2P18030_001	Banana	cytosol	50.0	84.23
KRH45161	Soybean	endoplasmic reticulum	81.08	83.74
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	81.08	83.74
Bra039172.1-P	Field mustard	mitochondrion	81.27	83.61
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.68	83.51
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.68	83.51
KRH01445	Soybean	nucleus	80.68	83.33
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.08	82.72
KRG93756	Soybean	plastid	81.87	76.54
Solyc12g040580.1.1	Tomato	cytosol	20.92	76.09
Bra023725.1-P	Field mustard	cytosol	20.32	75.56
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	69.32	75.0
VIT_02s0012g03060.t01	Wine grape	cytosol	10.36	74.29
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	30.48	71.16
Zm00001d049187_P001	Maize	plastid	66.14	65.48
TraesCS7A01G033600.1	Wheat	peroxisome	22.91	63.54
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.59	56.25
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	12.55	40.91

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
EntrezGene:541700	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2
UniProt:A0A1D6LJP0	ProteinID:AQK79960.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616
GO:GO:0005488	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019521	GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393	PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873
UniParc:UPI000844BC05	EnsemblPlantsGene:Zm00001d035925	EnsemblPlants:Zm00001d035925_P001	EnsemblPlants:Zm00001d035925_T001	:	:

Description

6-phosphogluconate dehydrogenase1 6-phosphogluconate dehydrogenase1

Coordinates

chr6:-:60489299..60491961

Molecular Weight (calculated)

54943.8 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.221

Length

502 amino acids

Sequence
(BLAST)

001: MVHGLRAAGC GLRRPTGPEE MALTRIGLAG LAVMGQNLAL NIAEKGFPIS VYNRTTSKVD ETVQRAKAEG NLPVYGFHDP ASFVKSIQKP RVVIMLVKAG
101: APVDQTIATL AAHLEQGDCI IDGGNEWYEN TERREKAMEE RGLLYLGMGV SGGEEGARNG PSLMPGGSFE AYKYVEDIVL KVAAQVPDSG PCVTYIGKGG
201: SGNFVKMVHN GIEYGDMQLI SEAYDVLKSV GKLTNSELHQ VFSEWNKGEL LSFLIEITAD IFGIKDEHGD GYLVDKVLDK TGMKGTGKWT VQQAAELSVA
301: APTIEASLDS RFLSGLKDER VEASKIFQGD YYSTGSPVDK AQLVEDVRQA LYASKICSYA QGMNIIKAKS AEKGWGLNLG ELARIWKGGC IIRAIFLDRI
401: KKAYDRNPGL ASLLVDPEFA QEIMDRQAAW RRVVCLAINN GVSTPGMSAS LAYFDSYRRD RLPANLVQAQ RDYFGAHTYE RVDMPGSFHT EWFKIARNIS
501: NN

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.