CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45161	Soybean	endoplasmic reticulum	83.24	91.98
KRH01445	Soybean	nucleus	82.87	91.56
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.14	87.63
GSMUA_Achr2P18030_001	Banana	cytosol	48.6	87.58
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.77	87.04
Zm00001d042184_P001	Maize	plastid	77.65	86.88
Bra039172.1-P	Field mustard	mitochondrion	78.77	86.68
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	77.28	86.46
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.03	86.39
OQU75707	Sorghum	mitochondrion	76.91	85.86
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	77.47	85.6
TraesCS3B01G565200.1	Wheat	golgi	75.61	84.76
TraesCS7A01G012000.1	Wheat	mitochondrion	75.42	84.55
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	75.23	84.34
Zm00001d035925_P001	Maize	cytosol, mitochondrion	76.54	81.87
TraesCS3D01G491400.1	Wheat	peroxisome	75.42	81.82
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	75.98	80.95
KXG34080	Sorghum	peroxisome	39.48	80.3
VIT_02s0012g03060.t01	Wine grape	cytosol	10.06	77.14
Bra023725.1-P	Field mustard	cytosol	19.37	77.04
Solyc12g040580.1.1	Tomato	cytosol	19.55	76.09
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	65.36	75.65
KRH41276	Soybean	nucleus	68.53	74.34
KRH60004	Soybean	cytosol	65.74	73.7
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	29.05	72.56
TraesCS7A01G033600.1	Wheat	peroxisome	18.81	55.8
HORVU7Hr1G006070.1	Barley	cytosol	7.26	46.99
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	11.55	40.26

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	EntrezGene:100799034	Gene3D:3.40.50.720
MapMan:3.9.1.3	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2
UniProt:A0A0R0EHR6	EMBL:ACUP02011617	EnsemblPlantsGene:GLYMA_19G038400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004616	GO:GO:0005488	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019521	GO:GO:0050661	GO:GO:0055114
InterPro:IPR013328	EnsemblPlants:KRG93756	ProteinID:KRG93756	ProteinID:KRG93756.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393
PFAM:PF03446	PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350
SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873	UniParc:UPI0006EE0404	:	:

Description

hypothetical protein

Coordinates

chr19:+:5386129..5388865

Molecular Weight (calculated)

59377.5 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.192

Length

537 amino acids

Sequence
(BLAST)

001: MLSTISGTPR SQFSSISLRP GLPLKLASSF AFCRCHNFCV GLVVHWKLTM AQPASLTRIG LAGLAVMGQN LALNIAEKGF PISVYNRTAS KVDETVERAK
101: QEGNLPVYGY HDPKFFVQSI QKPRVIIMLV KAGAPVDQTI KTLSAHLEKG DCIIDGGNEW YENTERREKA MSELGLLYLG MGVSGGEEGA RHGPSLMPGG
201: SFEAYKYIED ILLKVAAQVP DSGPCVTYIG KGGSGNFVKM IHNGIEYGDM QLIAEAYDVL KSVGKLSNEE LQSAFSEWNK GELLSFLIEI TADIFGIKDD
301: KGEGHLVDKV LDKTGMKGTG KWTVQQAAEL SIAAPTIEAS LDARFLSGLK EERVEASKVF KSSGFDEILS DQHVDKKQLI DDVRKALYAA KICSYAQGMN
401: LIRAKSIEKG WDLKLGELAR IWKGGCIIRA IFLDRIKKAY DRNPNLANLL VDPEFAKEIV DRQSAWRRVV CLAINYGTST PGMAASLAYF DTYRRERVPA
501: NLVQAQRDYF GAHTYERIDM EGSFHTEWFK LAKQSRT

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.