Factsheet for GSMUA_Achr5P03620_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g040580.1.1	Tomato	cytosol	24.14	81.16
VIT_02s0012g03060.t01	Wine grape	cytosol	11.21	74.29
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	34.27	73.95
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	76.08	73.54
Zm00001d042184_P001	Maize	plastid	75.43	72.92
KRH45161	Soybean	endoplasmic reticulum	76.08	72.63
KRH01445	Soybean	nucleus	75.86	72.43
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.0	71.75
OQU75707	Sorghum	mitochondrion	74.35	71.73
TraesCS3B01G565200.1	Wheat	golgi	73.49	71.19
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.35	71.13
TraesCS7A01G012000.1	Wheat	mitochondrion	73.28	70.98
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	73.06	70.77
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	73.49	70.16
Bra039172.1-P	Field mustard	mitochondrion	73.28	69.67
Zm00001d035925_P001	Maize	cytosol, mitochondrion	75.0	69.32
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	72.41	69.14
HORVU7Hr1G006160.4	Barley	peroxisome	73.49	68.89
TraesCS3D01G491400.1	Wheat	peroxisome	73.28	68.69
KXG34080	Sorghum	peroxisome	38.58	67.8
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	73.49	67.66
KRG93756	Soybean	plastid	75.65	65.36
GSMUA_Achr2P18030_001	Banana	cytosol	40.52	63.09
GSMUA_Achr3P16150_001	Banana	mitochondrion	58.41	57.66
Bra023725.1-P	Field mustard	cytosol	15.95	54.81
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.04	52.91
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.45	50.0
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	14.22	42.86
TraesCS7A01G033600.1	Wheat	peroxisome	14.87	38.12

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr5G03620_001	EnsemblPlants:GSMUA_Achr5P03620_001	EnsemblPlants:GSMUA_Achr5T03620_001	InterPro:IPR013328	UniProt:M0SVE1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00393	PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33
InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735	UniParc:UPI000295F3B0	SEG:seg

Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:GMGC_GENE;Acc:GSMUA_Achr5G03620_001]

Coordinates

chr5:-:2525098..2529048

Molecular Weight (calculated)

51242.7 Da

IEP (calculated)

7.552

GRAVY (calculated)

-0.060

Length

464 amino acids

Sequence
(BLAST)

001: MFDGLRLATS FGKISFCCHF DVVLIKDARL WFGCYQKFRV GFRFSLSRRV SVSLRQEIIR LFAFYLLLRD NLLGLNMALT RIGLAGLAVM GQNLALNIAE
101: KGFPISVYNR TTSKVDETVE RAKVEGNLPV YGFHDPASFV NSIQKPRVII MLVKAGAPVD QTIATLSAHL EKGDCIIDGG NEWYENTERR EKAMAELGLL
201: YLGMGVSGGE EGARNGPSLM PGGSYEAFRY IEDILLKVAA QVPDSGPCVT YIGKGGSGNF VKMIHNGIEY GDMQLIAEAY DVLKSVGKLT NDELQHVFSE
301: WNKGELLSFL IEITADIFGV KDDKGDGHLV DKVLDKTGMK GTGKWTVQQA AELSVAAPTI AASLDSRFLS GLKEERVEAA KVFQSGGFSD SAWRRVVCLA
401: INHGISTPGM STSLAYFDTY RRERVSANLV QAQRDYFGAH TYERVDMPGS FHTEWFKIAK QSKI

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.