Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P18030_001 | Banana | cytosol | 75.56 | 34.23 |
| CDY43238 | Canola | mitochondrion | 85.93 | 28.78 |
| TraesCS7A01G033600.1 | Wheat | peroxisome | 32.59 | 24.31 |
| Bra039172.1-P | Field mustard | mitochondrion | 87.41 | 24.18 |
| Bra021465.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 86.67 | 24.07 |
| AT3G02360.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 85.93 | 23.87 |
| KXG34080 | Sorghum | peroxisome | 46.67 | 23.86 |
| Solyc04g005160.1.1 | Tomato | extracellular, plastid | 78.52 | 22.51 |
| PGSC0003DMT400064670 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 80.74 | 22.47 |
| Os06t0111500-01 | Rice | extracellular, plasma membrane, plastid | 77.78 | 21.88 |
| KRH45161 | Soybean | endoplasmic reticulum | 78.52 | 21.81 |
| KRH01445 | Soybean | nucleus | 78.52 | 21.81 |
| Zm00001d042184_P001 | Maize | plastid | 77.04 | 21.67 |
| PGSC0003DMT400004861 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 77.78 | 21.65 |
| VIT_01s0010g01130.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 79.26 | 21.4 |
| OQU75707 | Sorghum | mitochondrion | 75.56 | 21.21 |
| TraesCS3B01G565200.1 | Wheat | golgi | 74.07 | 20.88 |
| TraesCS7A01G012000.1 | Wheat | mitochondrion | 73.33 | 20.67 |
| TraesCS7D01G030000.1 | Wheat | mitochondrion, peroxisome | 73.33 | 20.67 |
| Zm00001d035925_P001 | Maize | cytosol, mitochondrion | 75.56 | 20.32 |
| HORVU7Hr1G006160.4 | Barley | peroxisome | 73.33 | 20.0 |
| TraesCS3D01G491400.1 | Wheat | peroxisome | 73.33 | 20.0 |
| TraesCS4A01G455900.1 | Wheat | endoplasmic reticulum | 73.33 | 19.64 |
| Bra027685.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.37 | 19.51 |
| KRG93756 | Soybean | plastid | 77.04 | 19.37 |
| Bra025480.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 68.15 | 18.89 |
| GSMUA_Achr5P03620_001 | Banana | mitochondrion, peroxisome, plastid | 54.81 | 15.95 |
| HORVU7Hr1G006450.1 | Barley | cytosol | 1.48 | 3.51 |
| HORVU7Hr1G006190.1 | Barley | cytosol, extracellular, golgi | 0.74 | 3.12 |
| VIT_16s0013g01670.t01 | Wine grape | extracellular | 1.48 | 1.49 |
| HORVU7Hr1G006070.1 | Barley | cytosol | 0.74 | 1.2 |
Protein Annotations
| KEGG:00030+1.1.1.44 | KEGG:00480+1.1.1.44 | Gene3D:1.10.1040.10 | Gene3D:1.20.5.320 | MapMan:35.1 | InterPro:6-PGluconate_DH-like_C_sf |
| InterPro:6PGDH_C | InterPro:6PGD_dom2 | EnsemblPlantsGene:Bra023725 | EnsemblPlants:Bra023725.1 | EnsemblPlants:Bra023725.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004616 | GO:GO:0006098 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR013328 | UniProt:M4E4M2 |
| PFAM:PF00393 | PANTHER:PTHR11811 | PANTHER:PTHR11811:SF33 | SMART:SM01350 | SUPFAM:SSF48179 | UniParc:UPI0002543D84 |
Description
AT3G02360 (E=6e-022) | 6-phosphogluconate dehydrogenase family protein
Coordinates
chrA01:-:19363310..19364005
Molecular Weight (calculated)
15801.0 Da
IEP (calculated)
9.501
GRAVY (calculated)
-0.408
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGTRKWTVQ QEAELYVPSL TIKSSLDARF LSGLKDEHVE AAKVFKEGEL ARIWKGGCII RAIFLDRIKQ AELANLLVCL RVWTLEYFDS KRRERLPANF
101: VQAQRDYFGA HTYERTDVEG SFHTEWFKIA RQSMN
101: VQAQRDYFGA HTYERTDVEG SFHTEWFKIA RQSMN
001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
Arabidopsis Description
6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.