Factsheet for VIT_16s0013g01670.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g03060.t01	Wine grape	cytosol	25.37	48.57
CDY34724	Canola	mitochondrion	53.73	17.82
CDY57527	Canola	mitochondrion	53.73	17.82
CDY43238	Canola	mitochondrion	52.99	17.62
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	53.73	14.81
VIT_01s0010g01130.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.22	14.8
Bra039172.1-P	Field mustard	mitochondrion	53.73	14.75
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	52.99	14.64
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	52.99	14.61
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	50.75	14.02
Solyc04g005160.1.1	Tomato	extracellular, plastid	49.25	14.01
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	49.25	13.36
Bra023725.1-P	Field mustard	cytosol	1.49	1.48

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	MapMan:35.1	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C
InterPro:6PGD_dom2	ProteinID:CCB61248	ProteinID:CCB61248.1	UniProt:F6I2T1	EMBL:FN596738	GO:GO:0003674
GO:GO:0003824	GO:GO:0004616	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013328	PFAM:PF00393	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	SUPFAM:SSF48179	TMHMM:TMhelix	UniParc:UPI0002109EE8	ArrayExpress:VIT_16s0013g01670	EnsemblPlantsGene:VIT_16s0013g01670
EnsemblPlants:VIT_16s0013g01670.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr16:+:8562203..8565964

Molecular Weight (calculated)

14957.3 Da

IEP (calculated)

7.911

GRAVY (calculated)

0.139

Length

134 amino acids

Sequence
(BLAST)

001: MDFKVQMVVF LSLILFSYLL CFGCFTLSLN FPEGNRCMDQ PRKTRLSSPP TKFAGGPIGS FEAYKYIEDI LKVTAQVSDN GPCATYIDKR GSGNFVKMVH
101: NGIEYGDIQL IAKAYDVLKS IVETFIGLRE VLPP

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.