Factsheet for Bra039172.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	mitochondrion
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	96.93	97.33
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	95.9	96.3
KRH45161	Soybean	endoplasmic reticulum	88.73	89.09
KRH01445	Soybean	nucleus	88.32	88.68
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	88.11	88.66
Bra023725.1-P	Field mustard	cytosol	24.18	87.41
Solyc04g005160.1.1	Tomato	extracellular, plastid	83.81	86.84
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	86.27	86.8
Zm00001d042184_P001	Maize	plastid	85.04	86.46
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	85.04	86.46
VIT_01s0010g01130.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.52	86.4
OQU75707	Sorghum	mitochondrion	84.43	85.65
TraesCS3B01G565200.1	Wheat	golgi	83.2	84.76
TraesCS7A01G012000.1	Wheat	mitochondrion	82.99	84.55
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	82.79	84.34
GSMUA_Achr2P18030_001	Banana	cytosol	51.43	84.23
TraesCS3D01G491400.1	Wheat	peroxisome	83.2	82.02
HORVU7Hr1G006160.4	Barley	peroxisome	82.99	81.82
Zm00001d035925_P001	Maize	cytosol, mitochondrion	83.61	81.27
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	82.99	80.36
KXG34080	Sorghum	peroxisome	42.62	78.79
KRG93756	Soybean	plastid	86.68	78.77
Bra027685.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.57	73.72
Bra025480.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.36	73.51
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	69.67	73.28
TraesCS7A01G033600.1	Wheat	peroxisome	21.11	56.91
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.69	56.25
VIT_16s0013g01670.t01	Wine grape	extracellular	14.75	53.73
HORVU7Hr1G006450.1	Barley	cytosol	6.15	52.63
HORVU7Hr1G006070.1	Barley	cytosol	7.99	46.99

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	EnsemblPlantsGene:Bra039172
EnsemblPlants:Bra039172.1	EnsemblPlants:Bra039172.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616
GO:GO:0005488	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019521	GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328
UniProt:M4FDK1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393	PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076
PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735
TIGRFAMs:TIGR00873	UniParc:UPI0002547646	SEG:seg	:	:	:

Description

AT3G02360 (E=1e-266) | 6-phosphogluconate dehydrogenase family protein

Coordinates

chrA05:-:23636170..23637725

Molecular Weight (calculated)

53818.3 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.297

Length

488 amino acids

Sequence
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIASKGFP ISVYNRTTSK VDETVERAKK EGNLPVYGFH DPESFVNSIQ KPRVIIMLVK AGAPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV SENGFLYLGM GVSGGEEGAR NGPSLMPGGS FEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLTNEEL HSVFTEWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPSPTIESSL DARFLSGLKD
301: ERVQAAKVFK EGGFGDVLTD QTVDKKQLID DVRKALYASK ICSYAQGMNL IRAKSMEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LSINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKSNM

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.