Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- peroxisome 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34724 | Canola | mitochondrion | 79.84 | 96.04 |
| CDY57527 | Canola | mitochondrion | 79.84 | 96.04 |
| Bra039172.1-P | Field mustard | mitochondrion | 96.3 | 95.9 |
| CDY43238 | Canola | mitochondrion | 79.01 | 95.29 |
| Bra021465.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 94.86 | 94.86 |
| KRH45161 | Soybean | endoplasmic reticulum | 90.12 | 90.12 |
| PGSC0003DMT400064670 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 89.3 | 89.48 |
| KRH01445 | Soybean | nucleus | 89.09 | 89.09 |
| Solyc04g005160.1.1 | Tomato | extracellular, plastid | 85.39 | 88.11 |
| PGSC0003DMT400004861 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 87.65 | 87.84 |
| VIT_01s0010g01130.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 89.09 | 86.6 |
| Zm00001d042184_P001 | Maize | plastid | 84.98 | 86.04 |
| Bra023725.1-P | Field mustard | cytosol | 23.87 | 85.93 |
| GSMUA_Achr2P18030_001 | Banana | cytosol | 52.67 | 85.91 |
| Os06t0111500-01 | Rice | extracellular, plasma membrane, plastid | 84.36 | 85.42 |
| TraesCS3B01G565200.1 | Wheat | golgi | 83.54 | 84.76 |
| OQU75707 | Sorghum | mitochondrion | 83.74 | 84.62 |
| TraesCS7A01G012000.1 | Wheat | mitochondrion | 83.33 | 84.55 |
| TraesCS7D01G030000.1 | Wheat | mitochondrion, peroxisome | 83.13 | 84.34 |
| HORVU7Hr1G006160.4 | Barley | peroxisome | 83.33 | 81.82 |
| TraesCS3D01G491400.1 | Wheat | peroxisome | 83.33 | 81.82 |
| Zm00001d035925_P001 | Maize | cytosol, mitochondrion | 83.74 | 81.08 |
| TraesCS4A01G455900.1 | Wheat | endoplasmic reticulum | 83.33 | 80.36 |
| KXG34080 | Sorghum | peroxisome | 43.0 | 79.17 |
| KRG93756 | Soybean | plastid | 87.04 | 78.77 |
| GSMUA_Achr5P03620_001 | Banana | mitochondrion, peroxisome, plastid | 70.16 | 73.49 |
| AT1G64190.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 73.46 | 73.31 |
| AT5G41670.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 73.46 | 73.31 |
| TraesCS7A01G033600.1 | Wheat | peroxisome | 21.4 | 57.46 |
| HORVU7Hr1G006190.1 | Barley | cytosol, extracellular, golgi | 3.5 | 53.12 |
| VIT_16s0013g01670.t01 | Wine grape | extracellular | 14.61 | 52.99 |
| HORVU7Hr1G006450.1 | Barley | cytosol | 5.97 | 50.88 |
| HORVU7Hr1G006070.1 | Barley | cytosol | 8.02 | 46.99 |
Protein Annotations
| KEGG:00030+1.1.1.44 | KEGG:00480+1.1.1.44 | Gene3D:1.10.1040.10 | Gene3D:1.20.5.320 | Gene3D:3.40.50.720 | MapMan:3.9.1.3 |
| InterPro:6-PGluconate_DH-like_C_sf | InterPro:6PGDH_C | InterPro:6PGDH_Gnd/GntZ | InterPro:6PGDH_NADP-bd | InterPro:6PGD_dom2 | EntrezGene:821163 |
| UniProt:A0A178VK18 | ProteinID:AAG12595.1 | ProteinID:AEE73796.1 | ProteinID:AEE73797.1 | EMBL:AF424591 | EMBL:AK227160 |
| ArrayExpress:AT3G02360 | EnsemblPlantsGene:AT3G02360 | RefSeq:AT3G02360 | TAIR:AT3G02360 | RefSeq:AT3G02360-TAIR-G | EnsemblPlants:AT3G02360.1 |
| TAIR:AT3G02360.1 | EMBL:AY087341 | Unigene:At.16821 | EMBL:BT002299 | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004616 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005829 | GO:GO:0005975 |
| GO:GO:0006098 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 |
| GO:GO:0019521 | GO:GO:0019822 | GO:GO:0050661 | GO:GO:0055114 | GO:GO:0080173 | InterPro:IPR013328 |
| InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_186885.1 | RefSeq:NP_850502.1 | ProteinID:OAP06780.1 | PFAM:PF00393 | PFAM:PF03446 |
| PIRSF:PIRSF000109 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00076 | PANTHER:PTHR11811 | PANTHER:PTHR11811:SF33 | InterPro:Pgluconate_DH |
| UniProt:Q9FWA3 | SMART:SM01350 | SUPFAM:SSF48179 | SUPFAM:SSF51735 | TIGRFAMs:TIGR00873 | UniParc:UPI00000AC357 |
| SEG:seg | : | : | : | : | : |
Description
6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
Coordinates
chr3:+:481776..484152
Molecular Weight (calculated)
53580.2 Da
IEP (calculated)
7.490
GRAVY (calculated)
-0.283
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.