CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	mitochondrion
EpiLoc:	cytosol
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	95.43	95.62
TraesCS7A01G012000.1	Wheat	mitochondrion	92.93	93.32
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	92.72	93.11
TraesCS3B01G565200.1	Wheat	golgi	92.72	93.11
Zm00001d035925_P001	Maize	cytosol, mitochondrion	97.09	93.03
TraesCS3D01G491400.1	Wheat	peroxisome	92.93	90.3
HORVU7Hr1G006160.4	Barley	peroxisome	92.93	90.3
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	92.93	88.69
KXG34080	Sorghum	peroxisome	48.02	87.5
GSMUA_Achr2P18030_001	Banana	cytosol	52.39	84.56
Bra039172.1-P	Field mustard	mitochondrion	85.65	84.43
KRH45161	Soybean	endoplasmic reticulum	84.62	83.74
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.62	83.74
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.41	83.71
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.41	83.71
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.41	83.54
KRH01445	Soybean	nucleus	84.41	83.54
KRG93756	Soybean	plastid	85.86	76.91
VIT_02s0012g03060.t01	Wine grape	cytosol	11.02	75.71
Bra023725.1-P	Field mustard	cytosol	21.21	75.56
Solyc12g040580.1.1	Tomato	cytosol	21.62	75.36
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	71.73	74.35
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	31.6	70.7
EES08484	Sorghum	plastid	69.23	66.07
TraesCS7A01G033600.1	Wheat	peroxisome	24.12	64.09
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.74	56.25
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.1	40.91

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	UniProt:A0A194YGQ1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0005975
GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019521	GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328	ProteinID:KXG19135.1	InterPro:NAD(P)-bd_dom_sf
EnsemblPlants:OQU75707	ProteinID:OQU75707	ProteinID:OQU75707.1	ProteinID:OQU75708.1	ProteinID:OQU75709.1	ProteinID:OQU75710.1
PFAM:PF00393	PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33
InterPro:Pgluconate_DH	SMART:SM01350	EnsemblPlantsGene:SORBI_3010G009300	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873
UniParc:UPI0001CB1CF9	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:762651..768470

Molecular Weight (calculated)

52824.2 Da

IEP (calculated)

6.040

GRAVY (calculated)

-0.208

Length

481 amino acids

Sequence
(BLAST)

001: MALTRIGLAG LAVMGQNLAL NIAEKGFPIS VYNRTTSKVD ETVQRAKAEG NLPVYGFHDP ASFVNSIQKP RVVIMLVKAG APVDQTIATL AAHLEQGDCI
101: IDGGNEWYEN TERREKAMEE RGLLYLGMGV SGGEEGARNG PSLMPGGSFE AYKYIEDIVL KVAAQVPDSG PCVTYIGKGG SGNFVKMVHN GIEYGDMQLI
201: SEAYDVLKSV GKLTNSELHQ VFSEWNKGEL LSFLIEITAD IFGIKDEQGE GYLVDKVLDK TGMKGTGKWT VQQAAELSVA APTIEASLDS RFLSGLKDER
301: VEASKIFQGD YSTGLPVDKA QLIEDVRQAL YASKICSYAQ GMNIIKAKSS EKGWGLNLGE LARIWKGGCI IRAIFLDRIK KAYDRNSNLA NLLVDPEFAQ
401: EIMDRQAAWR RVVCLAINNG VSTPGMSASL AYFDSYRRDR LPANLVQAQR DYFGAHTYER VDMPGAFHTE WFKIARNISK N

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.