Factsheet for Solyc12g040580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18030_001	Banana	cytosol	79.71	36.91
KXG34080	Sorghum	peroxisome	54.35	28.41
Solyc05g010260.2.1	Tomato	cytosol	54.35	27.68
Solyc04g005160.1.1	Tomato	extracellular, plastid	86.96	25.48
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	5.8	25.0
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	81.16	24.14
Zm00001d042184_P001	Maize	plastid	78.26	22.5
KRH01445	Soybean	nucleus	78.99	22.43
KRH45161	Soybean	endoplasmic reticulum	78.99	22.43
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	75.36	21.67
OQU75707	Sorghum	mitochondrion	75.36	21.62
Zm00001d035925_P001	Maize	cytosol, mitochondrion	76.09	20.92
TraesCS3B01G565200.1	Wheat	golgi	72.46	20.88
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	72.46	20.88
TraesCS7A01G012000.1	Wheat	mitochondrion	72.46	20.88
TraesCS3D01G491400.1	Wheat	peroxisome	72.46	20.2
HORVU7Hr1G006160.4	Barley	peroxisome	72.46	20.2
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	72.46	19.84
KRG93756	Soybean	plastid	76.09	19.55
Solyc12g056120.1.1	Tomato	plastid	62.32	17.34
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.87	9.74
TraesCS7A01G033600.1	Wheat	peroxisome	4.35	3.31
VIT_02s0012g03060.t01	Wine grape	cytosol	0.72	1.43
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	0.0	0.0

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	MapMan:35.1	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C
InterPro:6PGD_dom2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013328
UniProt:K4DEV2	PFAM:PF00393	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	SMART:SM01350	SUPFAM:SSF48179
EnsemblPlantsGene:Solyc12g040580.1	EnsemblPlants:Solyc12g040580.1.1	UniParc:UPI000276A7EA	:	:	:

Description

No Description!

Coordinates

chr12:-:43414542..43414958

Molecular Weight (calculated)

15168.8 Da

IEP (calculated)

4.442

GRAVY (calculated)

-0.137

Length

138 amino acids

Sequence
(BLAST)

001: MQSIAEAYDV LRSVGKLSND ELHQVFSEWN KGELLSFLIE ITADIFGVKD DKADGYLVDK VLDKTGMKGT GKWTVQQSAE LSVAAPTIAA SLDSRFLSGL
101: KDERVEAAKV FESSGVSDTF LEQSVKGSEV WFYVHQSV

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.