Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g040570.1.1 | Tomato | extracellular, mitochondrion, plastid | 56.83 | 71.63 |
| Solyc12g040580.1.1 | Tomato | cytosol | 27.68 | 54.35 |
| Solyc04g005160.1.1 | Tomato | extracellular, plastid | 93.73 | 53.93 |
| Solyc12g056120.1.1 | Tomato | plastid | 77.86 | 42.54 |
Protein Annotations
| KEGG:00030+1.1.1.44 | KEGG:00480+1.1.1.44 | Gene3D:1.10.1040.10 | Gene3D:3.40.50.720 | MapMan:3.9.1.3 | InterPro:6-PGluconate_DH-like_C_sf |
| InterPro:6PGDH_C | InterPro:6PGDH_NADP-bd | InterPro:6PGD_dom2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004616 | GO:GO:0005488 | GO:GO:0006098 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR013328 | UniProt:K4BXJ9 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00393 | PFAM:PF03446 | PRINTS:PR00076 | PANTHER:PTHR11811 | PANTHER:PTHR11811:SF33 |
| InterPro:Pgluconate_DH | SMART:SM01350 | SUPFAM:SSF48179 | SUPFAM:SSF51735 | EnsemblPlantsGene:Solyc05g010260.2 | EnsemblPlants:Solyc05g010260.2.1 |
| UniParc:UPI000276700A | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:4428220..4429888
Molecular Weight (calculated)
29633.3 Da
IEP (calculated)
4.566
GRAVY (calculated)
-0.293
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQNLALNIA EKGFPISVYN RTTSKVDETV ERAKNEGNLP LYGFHDPESF VLSIQKPRVI IILVKAGAPV DQTIKTLSSY MEKGDCIIDG GNEWYENTER
101: REKEMAELGL RYLGMGVSGG EEGARNGPSL MPGGSFEAYK YIEDILLKVA AQVPDSGPCV TYIGKGGSGN FVKMVHNGIE YGDMQLIAEA YDVLKSVGKL
201: SNDELHQAFS EWNNGELQSF LIEITADIFG IKDDKADGHL VDKVLDKTGM KGTGKWTVQQ AAELSIAWIE G
101: REKEMAELGL RYLGMGVSGG EEGARNGPSL MPGGSFEAYK YIEDILLKVA AQVPDSGPCV TYIGKGGSGN FVKMVHNGIE YGDMQLIAEA YDVLKSVGKL
201: SNDELHQAFS EWNNGELQSF LIEITADIFG IKDDKADGHL VDKVLDKTGM KGTGKWTVQQ AAELSIAWIE G
001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI
Arabidopsis Description
6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.