Factsheet for TraesCS4A01G455900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
peroxisome 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G012000.1	Wheat	mitochondrion	95.04	100.0
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	94.84	99.79
TraesCS3B01G565200.1	Wheat	golgi	94.64	99.58
HORVU7Hr1G006160.4	Barley	peroxisome	95.24	96.97
Zm00001d042184_P001	Maize	plastid	88.69	93.12
OQU75707	Sorghum	mitochondrion	88.69	92.93
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	88.29	92.71
Zm00001d035925_P001	Maize	cytosol, mitochondrion	87.5	87.85
GSMUA_Achr2P18030_001	Banana	cytosol	49.4	83.56
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.36	83.33
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.16	83.13
Bra039172.1-P	Field mustard	mitochondrion	80.36	82.99
KXG34080	Sorghum	peroxisome	43.45	82.95
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.17	82.27
KRH45161	Soybean	endoplasmic reticulum	79.17	82.1
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.97	82.06
KRH01445	Soybean	nucleus	78.97	81.89
KRG93756	Soybean	plastid	80.95	75.98
VIT_02s0012g03060.t01	Wine grape	cytosol	10.32	74.29
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	67.66	73.49
Bra023725.1-P	Field mustard	cytosol	19.64	73.33
Solyc12g040580.1.1	Tomato	cytosol	19.84	72.46
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	29.76	69.77
TraesCS7A01G033600.1	Wheat	peroxisome	24.6	68.51
TraesCS1A01G357200.1	Wheat	unclear	65.67	66.07
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	12.5	40.91

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004616	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013328	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393
PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH
SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873	EnsemblPlantsGene:TraesCS4A01G455900	EnsemblPlants:TraesCS4A01G455900.1

Description

No Description!

Coordinates

chr4A:+:719178222..719179736

Molecular Weight (calculated)

55573.7 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.183

Length

504 amino acids

Sequence
(BLAST)

001: MHKLNYLTLF CFVHDVFGAP LFRYKMALTR IGLAGLAVMG QNLALNIAEK GFPISVYNRT TSKVDETVQR AKLEGNLPLY GFHDPASFVN SIQKPRVVIM
101: LVKAGAPVDQ TIATLAAHLE QGDCIVDGGN EWYENTERRE KAMEERGLLY LGMGVSGGEE GARHGPSMMP GGSLEAYQYI EDILLKVSAQ VPDSGPCVTY
201: IGKGGSGNFV KMVHNGIEYG DMQLIAEAYD VLKSVGKLTN GELQQVFAEW NKGELLSFLV EITADIFSIK DDQGEGYLVD KVLDKTGMKG TGKWTVQQAA
301: ELSVAAPTIE ASLDSRFLSG LKDERVAASK IFQGDYSSGE TVDKAQLIED VRKALYASKI CSYAQGMNII KAKSTEKGWG LNLGELARIW KGGCIIRASF
401: LDRIKKAYDR NGELANLLID PEFAQEIMDR QAAWRRVVCL AINNGVSTPG MSASLAYFDS YRRDRLPANL VQAQRDYFGA HTYERVDMPG SFHTEWYKIA
501: NSKI

Best Arabidopsis Sequence Match ( AT3G02360.1 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.