Factsheet for GSMUA_Achr2P18030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g040580.1.1	Tomato	cytosol	36.91	79.71
Bra023725.1-P	Field mustard	cytosol	34.23	75.56
KXG34080	Sorghum	peroxisome	58.72	66.29
TraesCS7A01G033600.1	Wheat	peroxisome	33.22	54.7
KRH45161	Soybean	endoplasmic reticulum	88.59	54.32
Zm00001d042184_P001	Maize	plastid	86.91	53.96
KRH01445	Soybean	nucleus	87.92	53.91
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	86.58	53.2
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	85.57	53.12
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	85.91	52.78
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	85.91	52.67
OQU75707	Sorghum	mitochondrion	84.56	52.39
TraesCS3B01G565200.1	Wheat	golgi	83.89	52.19
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	83.56	51.98
TraesCS7A01G012000.1	Wheat	mitochondrion	83.56	51.98
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.56	51.85
Bra039172.1-P	Field mustard	mitochondrion	84.23	51.43
TraesCS3D01G491400.1	Wheat	peroxisome	83.56	50.3
HORVU7Hr1G006160.4	Barley	peroxisome	83.56	50.3
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	5.37	50.0
Zm00001d035925_P001	Maize	cytosol, mitochondrion	84.23	50.0
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	83.56	49.4
GSMUA_Achr3P16150_001	Banana	mitochondrion	76.85	48.72
KRG93756	Soybean	plastid	87.58	48.6
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.7	41.27
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	63.09	40.52
VIT_02s0012g03060.t01	Wine grape	cytosol	3.02	12.86
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	5.7	11.04
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	0.0	0.0

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	MapMan:3.9.1.3	InterPro:6-PGluconate_DH-like_C_sf
InterPro:6PGDH_C	InterPro:6PGD_dom2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0006098
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr2G18030_001	EnsemblPlants:GSMUA_Achr2P18030_001	EnsemblPlants:GSMUA_Achr2T18030_001	InterPro:IPR013328	UniProt:M0S8Z4	PFAM:PF00393
PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179
UniParc:UPI0002949539	SEG:seg	:	:	:	:

Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:GMGC_GENE;Acc:GSMUA_Achr2G18030_001]

Coordinates

chr2:+:18460303..18461483

Molecular Weight (calculated)

33366.1 Da

IEP (calculated)

8.040

GRAVY (calculated)

-0.239

Length

298 amino acids

Sequence
(BLAST)

001: MIHNGIEYGD MQLIAEAYDV LKSVGNLSNQ ELQQVFSEWN KGELLSFLIE ITADIFGIKD DKGDGYLVDK VLDKTGMKGT GKWTVQQAAE LSVAAPTIAS
101: SLDSRFLSGL KEERVRASKV FQSGGFSDIL GGQPVDKAKL IEDVRQALYA SKICSYAQGM NLIRAKSIEK GWDLKLGELA RIWKGGCIIR AIFLDRIKKA
201: YDRNPELPNL LVDPEFAKEI MDRQAAWRRV ICLAINHGIS TPGMSASLAY FDTYRRESVP ANLVQAQRDY FGAHTYERVD MPGSFHTEWF KIAKQSKI

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.