Factsheet for Zm00001d042184_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0111500-01	Rice	extracellular, plasma membrane, plastid	95.0	95.0
TraesCS7A01G012000.1	Wheat	mitochondrion	93.12	93.32
TraesCS7D01G030000.1	Wheat	mitochondrion, peroxisome	92.92	93.11
TraesCS3B01G565200.1	Wheat	golgi	92.92	93.11
Zm00001d035925_P001	Maize	cytosol, mitochondrion	95.42	91.24
HORVU7Hr1G006160.4	Barley	peroxisome	93.12	90.3
TraesCS3D01G491400.1	Wheat	peroxisome	93.12	90.3
TraesCS4A01G455900.1	Wheat	endoplasmic reticulum	93.12	88.69
KXG34080	Sorghum	peroxisome	48.75	88.64
GSMUA_Achr2P18030_001	Banana	cytosol	53.96	86.91
Bra039172.1-P	Field mustard	mitochondrion	86.46	85.04
Bra021465.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	86.04	84.98
KRH45161	Soybean	endoplasmic reticulum	86.04	84.98
AT3G02360.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	86.04	84.98
PGSC0003DMT400004861	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	85.62	84.74
PGSC0003DMT400064670	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	85.62	84.74
KRH01445	Soybean	nucleus	85.62	84.57
Solyc12g040580.1.1	Tomato	cytosol	22.5	78.26
KRG93756	Soybean	plastid	86.88	77.65
VIT_02s0012g03060.t01	Wine grape	cytosol	11.25	77.14
Bra023725.1-P	Field mustard	cytosol	21.67	77.04
GSMUA_Achr5P03620_001	Banana	mitochondrion, peroxisome, plastid	72.92	75.43
Solyc12g040570.1.1	Tomato	extracellular, mitochondrion, plastid	31.25	69.77
Zm00001d049187_P001	Maize	plastid	70.0	66.27
TraesCS7A01G033600.1	Wheat	peroxisome	23.96	63.54
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	3.75	56.25
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.33	41.56

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
EntrezGene:541699	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2
UniProt:A0A1D6N1Z8	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0005488
GO:GO:0005975	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019521	GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328	InterPro:NAD(P)-bd_dom_sf
ProteinID:ONM34742.1	PFAM:PF00393	PFAM:PF03446	PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873
UniParc:UPI0001CA98DB	EnsemblPlantsGene:Zm00001d042184	EnsemblPlants:Zm00001d042184_P001	EnsemblPlants:Zm00001d042184_T001	:	:

Description

6-phosphogluconate dehydrogenase26-phosphogluconate dehydrogenase%2C decarboxylating

Coordinates

chr3:-:155339409..155340851

Molecular Weight (calculated)

52659.1 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.181

Length

480 amino acids

Sequence
(BLAST)

001: MALTRIGLAG LAVMGQNLAL NIAEKGFPIS VYNRTTSKVD ETVQRAKVEG NLPVFGFHDP ASFVSSIQKP RVVIMLVKAG APVDQTIATL AAHLDQGDCI
101: VDGGNEWYEN TERREKAMEE RGLLYLGMGV SGGEEGARNG PSLMPGGSFE AYKYIEDILL KVAAQVPDSG PCVTYIGKGG SGNFVKMVHN GIEYGDMQLI
201: AEAYDVLKSV GKLTNSELHQ VFSEWNKGEL LSFLIEITAD IFGIKDDKGE GYLVDKVLDK TGMKGTGKWT VQQAAELSVA APTIEASLDS RFLSGLKDER
301: VEASKIFQGD YSTGLPVDKA QLIEDVRQAL YASKICSYAQ GMNIIKAKSS EKGWGLNLGE LARIWKGGCI IRAIFLDRIK KAYDRNPNLA NLLVDPEFAQ
401: EIIDRQAAWR RVVCLAINNG VSTPGMSASL AYFDSYRRDR LPANLVQAQR DYFGAHTYER VDMPGSFHTE WFKIARNSKI

Best Arabidopsis Sequence Match ( AT3G02360.2 )
(BLAST)

001: MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD
101: CIVDGGNEWY ENTERREKAV AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK GGSGNFVKMV HNGIEYGDMQ
201: LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD
301: ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV
401: DPEFAKEIIE RQSAWRRVVC LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI ARQSKI

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.