CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g07390.t01	Wine grape	cytosol	31.2	58.4
CDX99921	Canola	cytosol	98.72	36.04
AT5G51430.1	Thale cress	cytosol	94.87	26.55
CDY00475	Canola	cytosol	81.62	24.24
Bra028252.1-P	Field mustard	cytosol	81.62	24.21
CDY56655	Canola	cytosol	78.63	23.35
KRH39845	Soybean	cytosol	82.05	23.02
GSMUA_Achr1P16820_001	Banana	cytosol	80.34	22.98
CDX91578	Canola	cytosol	78.63	22.97
VIT_16s0022g00490.t01	Wine grape	cytosol	81.62	22.79
Solyc05g006950.2.1	Tomato	cytosol	78.21	21.92
PGSC0003DMT400045408	Potato	cytosol	77.35	21.68
EER90199	Sorghum	cytosol	75.64	21.59
KRH23955	Soybean	cytosol	73.5	21.31
TraesCS7B01G372700.1	Wheat	cytosol	73.08	20.78
TraesCS7D01G458300.1	Wheat	cytosol	73.08	20.78
TraesCS7A01G470900.1	Wheat	cytosol	72.65	20.66
HORVU7Hr1G107700.1	Barley	cytosol	72.22	20.53
Zm00001d046973_P001	Maize	cytosol	74.36	20.52
VIT_04s0008g07380.t01	Wine grape	cytosol	0.85	1.67
Os06t0669600-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00472	EnsemblPlantsGene:GSBRNA2T00110172001	GO:A0A078EH87	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0017119
InterPro:COG7	PANTHER:PTHR21443	PFAM:PF10191	ProteinID:CDY00472	ProteinID:CDY00472.1	UniParc:UPI0004EE7CC7
MapMan:22.6.2.7	:	:	:	:	:

Description

BnaA10g08010D

Coordinates

chrLK031919:-:420967..421891

Molecular Weight (calculated)

26022.2 Da

IEP (calculated)

4.537

GRAVY (calculated)

-0.052

Length

234 amino acids

Sequence
(BLAST)

001: MAGRASLDVA AIRLVDVPEK ARKLLNLLEQ SKDPRFHALP LASQRVAAFA DTVNELVYDI LISKVRQRLG EVSRLPIWSS VEEQTAFALP NFSSYPQAYV
101: TSVGEYLLTL PQQLEPLAEG ISTNGDSNNE DAQFFATEWM FKVAEGATAL YMEQLRGIQY ISDRGAQQLC VDIEYLSNVL AALSMPIPPV LATFQTCLAT
201: PRDELKDVMK SDAGRELDFP TANLVCKMRR ISFD

Best Arabidopsis Sequence Match ( AT5G51430.1 )
(BLAST)

001: MMLDLGPFSD EKFDAKRWVN SSCQARHPQD SLEKHLVDLE MKLQIASEEI GASLEEQSGG ALLRVPRATR DVLRLRDDAV SLRGSVAGIL QKLKKAEGSS
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD

Arabidopsis Description

EYEConserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.