Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90199 | Sorghum | cytosol | 92.02 | 21.1 |
| TraesCS7D01G458300.1 | Wheat | cytosol | 92.02 | 21.02 |
| TraesCS7B01G372700.1 | Wheat | cytosol | 92.02 | 21.02 |
| TraesCS7A01G470900.1 | Wheat | cytosol | 92.02 | 21.02 |
| HORVU7Hr1G107700.1 | Barley | cytosol | 91.49 | 20.9 |
| Zm00001d046973_P001 | Maize | cytosol | 92.02 | 20.4 |
| CDX99921 | Canola | cytosol | 64.36 | 18.88 |
| GSMUA_Achr1P16820_001 | Banana | cytosol | 75.0 | 17.24 |
| KRH23955 | Soybean | cytosol | 68.62 | 15.99 |
| CDY56655 | Canola | cytosol | 66.49 | 15.86 |
| CDY00475 | Canola | cytosol | 64.89 | 15.48 |
| Bra028252.1-P | Field mustard | cytosol | 64.89 | 15.46 |
| VIT_16s0022g00490.t01 | Wine grape | cytosol | 68.62 | 15.39 |
| KRH39845 | Soybean | cytosol | 68.09 | 15.35 |
| CDX91578 | Canola | cytosol | 64.89 | 15.23 |
| Bra022547.1-P | Field mustard | cytosol | 66.49 | 15.08 |
| PGSC0003DMT400045408 | Potato | cytosol | 65.43 | 14.73 |
| Solyc05g006950.2.1 | Tomato | cytosol | 65.43 | 14.73 |
| AT5G51430.1 | Thale cress | cytosol | 65.43 | 14.71 |
| VIT_04s0008g07380.t01 | Wine grape | cytosol | 1.6 | 2.5 |
| CDY00472 | Canola | cytosol | 0.0 | 0.0 |
| VIT_04s0008g07390.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:22.6.2.7 | UniProt:A0A0P0WZV8 | ProteinID:BAS99064.1 | InterPro:COG7 | ncoils:Coil | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006890 | GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0017119 |
| EnsemblPlantsGene:Os06g0669600 | EnsemblPlants:Os06t0669600-01 | PFAM:PF10191 | PANTHER:PTHR21443 | UniParc:UPI000393C3F7 | SEG:seg |
Description
Similar to predicted protein. (Os06t0669600-01)
Coordinates
chr6:-:27728543..27733488
Molecular Weight (calculated)
20447.2 Da
IEP (calculated)
4.621
GRAVY (calculated)
-0.129
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: ALDARHPSEP LDRFLADAEE RLRSAADDAA AALERDSADA LRRVPLACRD ALRLRDDAVS LRSHLASVLQ SLSQAEGSSA ESITALARID TVKQRMEAAY
101: ATLQDAAGLA QLSQSVEDVF SSGDLPKAAE TLATMRHCLS AVGEVAEFAN VRKQLEVLEE RLDDMVQPRL VDALSNRKVF LTNLIYIC
101: ATLQDAAGLA QLSQSVEDVF SSGDLPKAAE TLATMRHCLS AVGEVAEFAN VRKQLEVLEE RLDDMVQPRL VDALSNRKVF LTNLIYIC
001: MMLDLGPFSD EKFDAKRWVN SSCQARHPQD SLEKHLVDLE MKLQIASEEI GASLEEQSGG ALLRVPRATR DVLRLRDDAV SLRGSVAGIL QKLKKAEGSS
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD
Arabidopsis Description
EYEConserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGN0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.