Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00472 | Canola | cytosol | 36.04 | 98.72 |
| CDY00475 | Canola | cytosol | 88.46 | 71.95 |
| AT5G51430.1 | Thale cress | cytosol | 92.36 | 70.81 |
| CDY56655 | Canola | cytosol | 86.74 | 70.56 |
| CDX91578 | Canola | cytosol | 86.74 | 69.41 |
| Os06t0669600-01 | Rice | plasma membrane | 18.88 | 64.36 |
| KRH39845 | Soybean | cytosol | 76.29 | 58.63 |
| KRH23955 | Soybean | cytosol | 73.32 | 58.24 |
| VIT_16s0022g00490.t01 | Wine grape | cytosol | 76.13 | 58.23 |
| VIT_04s0008g07390.t01 | Wine grape | cytosol | 11.23 | 57.6 |
| Solyc05g006950.2.1 | Tomato | cytosol | 72.39 | 55.57 |
| PGSC0003DMT400045408 | Potato | cytosol | 72.23 | 55.45 |
| GSMUA_Achr1P16820_001 | Banana | cytosol | 68.17 | 53.42 |
| EER90199 | Sorghum | cytosol | 65.21 | 50.98 |
| TraesCS7D01G458300.1 | Wheat | cytosol | 63.96 | 49.82 |
| TraesCS7A01G470900.1 | Wheat | cytosol | 63.81 | 49.7 |
| TraesCS7B01G372700.1 | Wheat | cytosol | 63.81 | 49.7 |
| HORVU7Hr1G107700.1 | Barley | cytosol | 63.49 | 49.45 |
| Zm00001d046973_P001 | Maize | cytosol | 64.9 | 49.06 |
| VIT_04s0008g07380.t01 | Wine grape | cytosol | 1.56 | 8.33 |
Protein Annotations
| EnsemblPlants:CDX99921 | EnsemblPlantsGene:GSBRNA2T00108752001 | GO:A0A078EFM3 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0017119 |
| InterPro:COG7 | ncoils:Coil | PANTHER:PTHR21443 | PFAM:PF10191 | ProteinID:CDX99921 | ProteinID:CDX99921.1 |
| UniParc:UPI0004EEAC0F | MapMan:22.6.2.7 | : | : | : | : |
Description
BnaC09g27840D
Coordinates
chrLK031915:+:720415..723481
Molecular Weight (calculated)
71056.3 Da
IEP (calculated)
4.689
GRAVY (calculated)
-0.071
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVDLGPFSD EEFDAKRWVN STCQARHPQD SLEKHLVDLE MKLQIASEEI GSSLEEQSGS ALLRVPRATR DVLRLRDDAV SLRSSVAGIL QKLKKAEGSS
101: ADCIATLARV DSVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTFHKV
201: DVAQDLRGIL IRIGRFKSLE LQYSKVRLKP IKQLWDDFDT KQRPNKLASE RSETQTLSSG DELQLTSFAS WLPSFYDELL LYLEQEWKWC MVAFPDDYMT
301: LVPKLLVETM GVLGASFVSR LNLATGDAVP ETKALAKGQI FLLSLVLYPE CLGLLASMVM SRSSVFEASL RATLARLNSS LSISLFGTNL DQNLSHLTSE
401: QTAGDLSMAG RASLDVAAIR LVDVPEKARK LLNLLEQSKD PRFHALPLAS QRVAAFADTV NELVYDILIS KVRQRLGEVS RLPIWSSVEE QTAFALPNFS
501: SYPQAYVTSV GEYLLTLPQQ LEPLAEGIST NGDSNNEDAQ FFATEWMFKV AEGATALYME QLRGIQYISD RGAQQLCVDI EYLSNVLAAL SMPIPPVLAT
601: FQTCLATPRD ELKDVMKSEA GSELDFLTAN LVCKMRRISF D
101: ADCIATLARV DSVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTFHKV
201: DVAQDLRGIL IRIGRFKSLE LQYSKVRLKP IKQLWDDFDT KQRPNKLASE RSETQTLSSG DELQLTSFAS WLPSFYDELL LYLEQEWKWC MVAFPDDYMT
301: LVPKLLVETM GVLGASFVSR LNLATGDAVP ETKALAKGQI FLLSLVLYPE CLGLLASMVM SRSSVFEASL RATLARLNSS LSISLFGTNL DQNLSHLTSE
401: QTAGDLSMAG RASLDVAAIR LVDVPEKARK LLNLLEQSKD PRFHALPLAS QRVAAFADTV NELVYDILIS KVRQRLGEVS RLPIWSSVEE QTAFALPNFS
501: SYPQAYVTSV GEYLLTLPQQ LEPLAEGIST NGDSNNEDAQ FFATEWMFKV AEGATALYME QLRGIQYISD RGAQQLCVDI EYLSNVLAAL SMPIPPVLAT
601: FQTCLATPRD ELKDVMKSEA GSELDFLTAN LVCKMRRISF D
001: MMLDLGPFSD EKFDAKRWVN SSCQARHPQD SLEKHLVDLE MKLQIASEEI GASLEEQSGG ALLRVPRATR DVLRLRDDAV SLRGSVAGIL QKLKKAEGSS
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD
Arabidopsis Description
EYEConserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGN0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.