CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39845	Soybean	cytosol	97.4	94.24
PGSC0003DMT400045408	Potato	cytosol	78.07	75.45
AT5G51430.1	Thale cress	cytosol	77.94	75.24
Solyc05g006950.2.1	Tomato	cytosol	77.7	75.09
Bra022547.1-P	Field mustard	cytosol	76.33	74.31
CDY00472	Canola	cytosol	21.31	73.5
CDY00475	Canola	cytosol	71.62	73.35
CDY56655	Canola	cytosol	71.62	73.35
VIT_04s0008g07380.t01	Wine grape	cytosol	10.9	73.33
CDX99921	Canola	cytosol	58.24	73.32
Bra028252.1-P	Field mustard	cytosol	71.62	73.26
CDX91578	Canola	cytosol	71.5	72.03
GSMUA_Achr1P16820_001	Banana	cytosol	72.37	71.39
Os06t0669600-01	Rice	plasma membrane	15.99	68.62
EER90199	Sorghum	cytosol	69.39	68.29
TraesCS7A01G470900.1	Wheat	cytosol	69.14	67.8
TraesCS7B01G372700.1	Wheat	cytosol	69.14	67.8
TraesCS7D01G458300.1	Wheat	cytosol	69.14	67.8
HORVU7Hr1G107700.1	Barley	cytosol	68.9	67.56
Zm00001d046973_P001	Maize	cytosol	68.65	65.33
VIT_04s0008g07390.t01	Wine grape	cytosol	9.05	58.4

Protein Annotations

EntrezGene:100794449	MapMan:22.6.2.7	EMBL:ACUP02007164	InterPro:COG7	EnsemblPlantsGene:GLYMA_12G013000	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0006890	GO:GO:0007030	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0017119
UniProt:I1LP19	EnsemblPlants:KRH23955	ProteinID:KRH23955	ProteinID:KRH23955.1	PFAM:PF10191	PANTHER:PTHR21443
UniParc:UPI00023CD057	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:934229..940832

Molecular Weight (calculated)

89744.5 Da

IEP (calculated)

4.811

GRAVY (calculated)

-0.147

Length

807 amino acids

Sequence
(BLAST)

001: MMLDLGPFSN ENFDPKKWIN SACQSRHPQD SLDKHLVDME MKLQMVSEEI AASLEEQSAA ALLRVPRATR DVIRLRDDAV SLRSAVSSIL QKLKKAEGSS
101: AESIAALAKV DVVKQRMEAA YETLQDAAGL TQLSATVEDV FASGDLPRAA ETLANMRHCL SAVGEVAEFA NIRKQLEVLE DRLDNMVQPR LMDALSNRKV
201: DAAQDLRGIL IRIGRFKSLE SQYVKVHLKP IKQLWEDFDS RERASKPANE KNEMDRTSSG GDFQSVSPAI PFSSWLPSFY DELLLYLEQE WKWCMIAFPE
301: DYKTLVPKLL SETMMAIGSS FISRINLAIG DAVPETKALA KGLLDILAGD MQKGIKLQTK HLEALIELHN MTGTFARNIQ HLFSVSDVRF LMDVLKSVYL
401: PYESFKQRYG QMERAILSAE IAGVDLRGAV IRGLGAQGVE LSETVRRMEE SIPQIIILLE AAAERCINFT GGSEADELIL ALDDIMLQYI STLQETLKSL
501: RTVCGVDYGS DGTFKKDMEK KDGNQNARRV DLISNEEEWS IVQGALQILT VADNLTSRSS VFEASLRATL ARLSTTLSFS AFGSSLDQHQ AINSSVDGEP
601: SYGGRAALDM ATLRLVDVPE KARKLFNLLN QSKDPRFHAL PVASQRVASF TDTVNELVYD VLISKVRQRL SDVSRLPIWS SVEEQGSFPL PTFSAYPQSY
701: VTSVGEYLLT LPQQLEPLAE GISNNEVNDE AQFFATEWMF KVAEGATALY IEQLRGIQYI SDRGAQQLSV DIEYLSNVLS ALSMPIPPVL ATFQSCLSTP
801: RNQLKIF

Best Arabidopsis Sequence Match ( AT5G51430.1 )
(BLAST)

001: MMLDLGPFSD EKFDAKRWVN SSCQARHPQD SLEKHLVDLE MKLQIASEEI GASLEEQSGG ALLRVPRATR DVLRLRDDAV SLRGSVAGIL QKLKKAEGSS
101: ADCIAALARV DNVKQRMEAA YKTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLASMRNCL SAVGEVAEFA NVRKQLEVLE DRLEAMVQPR LTDALTYHKV
201: DVAQDLRVIL IRIGRFKSLE LQYSKVRLKP IKQLWEDFDT KQRANKLANE RSESQRLSSG DEFQSTSSQT SFASWLTSFY DELLLYLEQE WKWCMVAFPD
301: DYMTLVPKLL VETMGVLGAS FVSRLNLATG DAVPETKALA KGVMDLLSGD LPKGINIQTK HLEALIELHN VTGSFARNIQ HLFAESELRI LIDTLKAVYS
401: PFESFKQKYG KMERAILSSE IAVVDLRGAV TRGVGAQGIE LSETVRRMEE SIPQVVVLLE AAVERCIGFT GGSEADELIL ALDDIMLQYI SMLQETLKSL
501: RVVCGVDGTG DGVGSKKDAS AEKRESSRKM DLTSNEEWSI VQGALQILTV ADCLTSRSSV FEASLRATLA RLNSSLSISL FGTNLDHNLS HLKSEQTAGD
601: LSMAGRASMD VAAIRLVDVP EKAHKLLNLL EQSKDPRFHA LPLASQRVAA FADTVNELVY DVLISKVRQR LGEVSRLPIW SSVEEQTAFP LPNFSSYPQS
701: YVTSVGEYLL TLPQQLEPLA EGISTNGDSN NEDAQFFATE WMFKVAEGAT ALYMDQLRGI QYISDRGAQQ LSVDIEYLSN VLSALSMPIP PVLATFQTCL
801: ATPRGELKDV MKSEAGNELD CPTANLVCKM RRISFD

Arabidopsis Description

EYEConserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.