CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55641	Canola	plastid	97.89	98.82
CDX99465	Canola	plastid	94.85	95.74
CDX78860	Canola	plastid	93.91	94.8
AT4G18480.1	Thale cress	plastid	92.74	93.4
KRH21317	Soybean	nucleus, plastid	80.8	81.95
KRH10981	Soybean	nucleus, plastid	80.33	81.47
CDY50485	Canola	plastid	63.23	79.88
VIT_10s0003g00890.t01	Wine grape	plastid	79.63	79.81
KRH50153	Soybean	plastid	77.05	79.47
CDX87756	Canola	plastid	62.06	78.4
KRH20341	Soybean	plastid	76.58	77.67
PGSC0003DMT400068480	Potato	plastid	76.81	76.81
Solyc10g008740.2.1	Tomato	plastid	76.58	76.58
Os03t0563300-01	Rice	plastid	74.24	76.39
TraesCS7D01G467500.1	Wheat	plastid	74.0	75.24
TraesCS7A01G480700.1	Wheat	plastid	74.0	75.06
TraesCS7B01G382800.3	Wheat	plastid	73.77	75.0
EES16721	Sorghum	plastid	74.0	74.88
GSMUA_Achr11P...	Banana	plastid	62.3	72.48
Zm00001d023536_P002	Maize	plastid	74.0	68.85
GSMUA_Achr6P21670_001	Banana	plastid	51.29	56.88
CDX93557	Canola	plastid	31.85	17.99
CDX95054	Canola	plastid	31.38	17.77

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	MapMan:7.12.6.1.3	GO:A0A078EK71	InterPro:AAA+_ATPase
EnsemblPlants:CDY01542	ProteinID:CDY01542	ProteinID:CDY01542.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015979	GO:GO:0015995	GO:GO:0016851	GO:GO:0016874	EnsemblPlantsGene:GSBRNA2T00112574001	InterPro:Mg_chelatase_ATPase-isu
InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	MetaCyc:PWY-5531
MetaCyc:PWY-7159	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR02030	UniPathway:UPA00668	UniParc:UPI0003E635D3
SEG:seg	:	:	:	:	:

Description

BnaC07g35320D

Coordinates

chrLK031927:-:507745..509531

Molecular Weight (calculated)

46528.8 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.219

Length

427 amino acids

Sequence
(BLAST)

001: MASLLGTSSI RASPSLSSSS SSSSSSTPSI SPICFRPGRI CGRVLNAGIQ IRPKKNRSRH HVSVMNVATE INSTEQQVGK FDSKKSARPV YPFAAIVGQD
101: EMKLCLLLNV IDPKIGGVMI MGDRGTGKST TVRSLVDLLP EITVVAGDPY NSDPLDPEFM GVEVRERVER GEQVPVIATK INMVDLPLGA TEDRVCGTID
201: IEKALTEGVK AFEPGLLAKA NRGILYVDEV NLLDDHLVDV LLDSAASGWN TVEREGISIS HPARFILIGS GNPEEGELRP QLLDRFGMHA QVGTVRDAEL
301: RVKIVEERAR FDSDPKEFRD TYKTEQDKLQ DQISNARSCL SSVQIDRQLK VKISKVCSEL NVDGLRGDIV TNRAAKALAA LKGKDRVTAD DVATVIPNCL
401: RHRLRKDPLE SIDSGVLVSE KFAEVFS

Best Arabidopsis Sequence Match ( AT4G18480.1 )
(BLAST)

001: MASLLGTSSS AIWASPSLSS PSSKPSSSPI CFRPGKLFGS KLNAGIQIRP KKNRSRYHVS VMNVATEINS TEQVVGKFDS KKSARPVYPF AAIVGQDEMK
101: LCLLLNVIDP KIGGVMIMGD RGTGKSTTVR SLVDLLPEIN VVAGDPYNSD PIDPEFMGVE VRERVEKGEQ VPVIATKINM VDLPLGATED RVCGTIDIEK
201: ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDADLRVK
301: IVEERARFDS NPKDFRDTYK TEQDKLQDQI STARANLSSV QIDRELKVKI SRVCSELNVD GLRGDIVTNR AAKALAALKG KDRVTPDDVA TVIPNCLRHR
401: LRKDPLESID SGVLVSEKFA EIFS

Arabidopsis Description

CHLI1Magnesium-chelatase subunit ChlI-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P16127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.