CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78860	Canola	plastid	99.05	99.05
CDY55641	Canola	plastid	95.27	95.27
CDY01542	Canola	plastid	95.74	94.85
AT4G18480.1	Thale cress	plastid	95.04	94.81
KRH21317	Soybean	nucleus, plastid	82.27	82.66
KRH10981	Soybean	nucleus, plastid	81.8	82.19
KRH50153	Soybean	plastid	78.72	80.43
CDY50485	Canola	plastid	64.07	80.18
VIT_10s0003g00890.t01	Wine grape	plastid	80.14	79.58
CDX87756	Canola	plastid	63.12	78.99
KRH20341	Soybean	plastid	77.78	78.15
PGSC0003DMT400068480	Potato	plastid	77.78	77.05
Solyc10g008740.2.1	Tomato	plastid	77.31	76.58
Os03t0563300-01	Rice	plastid	74.47	75.9
TraesCS7D01G467500.1	Wheat	plastid	74.0	74.52
TraesCS7B01G382800.3	Wheat	plastid	73.76	74.29
TraesCS7A01G480700.1	Wheat	plastid	73.76	74.11
EES16721	Sorghum	plastid	73.76	73.93
GSMUA_Achr11P...	Banana	plastid	62.88	72.48
Zm00001d023536_P002	Maize	plastid	74.47	68.63
GSMUA_Achr6P21670_001	Banana	plastid	51.3	56.36
CDX93557	Canola	plastid	31.44	17.59
CDX95054	Canola	plastid	30.97	17.37

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	MapMan:7.12.6.1.3	GO:A0A078EBJ0	UniProt:A0A078EBJ0
InterPro:AAA+_ATPase	EnsemblPlants:CDX99465	ProteinID:CDX99465	ProteinID:CDX99465.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016851	GO:GO:0016874
EnsemblPlantsGene:GSBRNA2T00107809001	InterPro:Mg_chelatase_ATPase-isu	InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PANTHER:PTHR32039
PANTHER:PTHR32039:SF9	MetaCyc:PWY-5531	MetaCyc:PWY-7159	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR02030
UniPathway:UPA00668	UniParc:UPI0004EE8C4C	SEG:seg	:	:	:

Description

BnaC01g10870DMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A078EBJ0]

Coordinates

chrLK031910:+:867393..868951

Molecular Weight (calculated)

46022.2 Da

IEP (calculated)

6.416

GRAVY (calculated)

-0.218

Length

423 amino acids

Sequence
(BLAST)

001: MASLLGTSSS AICASHSLSS SSSTPSISPI CFRPGKICGG KLNAGIQIRP KKNRSRHHVS VMNVATEINS TEQVGKFDSK KSARPVYPFA AIVGQDEMKL
101: CLLLNVIDPK IGGVMIMGDR GTGKSTTVRS LVDLLPEIKV VAGDPYNSDP LDPEFMGVEV RERVERGEQV PVVATKINMV DLPLGATEDR VCGTIDIEKA
201: LTEGVKAFEP GLLAKANRGI LYVDEVNLLD DHLVDVLLDS AASGWNTVER EGISISHPAR FILIGSGNPE EGELRPQLLD RFGMHAQVGT VRDADLRVKI
301: VEERARFDSN PQDFRETYKT EQDKLQDQIS NARSNLSSVQ IDRELKVKIS KVCSELNVDG LRGDIVTNRA AKALAALKGK DRVTADDVAT VIPNCLRHRL
401: RKDPLESIDS GVLVSEKFAE VFS

Best Arabidopsis Sequence Match ( AT4G18480.1 )
(BLAST)

001: MASLLGTSSS AIWASPSLSS PSSKPSSSPI CFRPGKLFGS KLNAGIQIRP KKNRSRYHVS VMNVATEINS TEQVVGKFDS KKSARPVYPF AAIVGQDEMK
101: LCLLLNVIDP KIGGVMIMGD RGTGKSTTVR SLVDLLPEIN VVAGDPYNSD PIDPEFMGVE VRERVEKGEQ VPVIATKINM VDLPLGATED RVCGTIDIEK
201: ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDADLRVK
301: IVEERARFDS NPKDFRDTYK TEQDKLQDQI STARANLSSV QIDRELKVKI SRVCSELNVD GLRGDIVTNR AAKALAALKG KDRVTPDDVA TVIPNCLRHR
401: LRKDPLESID SGVLVSEKFA EIFS

Arabidopsis Description

CHLI1Magnesium-chelatase subunit ChlI-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P16127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.