Factsheet for PGSC0003DMT400068480

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g008740.2.1	Tomato	plastid	98.59	98.59
VIT_10s0003g00890.t01	Wine grape	plastid	82.9	83.1
KRH10981	Soybean	nucleus, plastid	80.8	81.95
KRH21317	Soybean	nucleus, plastid	80.56	81.71
KRH50153	Soybean	plastid	78.45	80.92
KRH20341	Soybean	plastid	77.28	78.38
TraesCS7A01G480700.1	Wheat	plastid	77.28	78.38
TraesCS7D01G467500.1	Wheat	plastid	76.81	78.1
TraesCS7B01G382800.3	Wheat	plastid	76.81	78.1
AT5G45930.1	Thale cress	plastid	76.35	77.99
CDX99465	Canola	plastid	77.05	77.78
AT4G18480.1	Thale cress	plastid	77.05	77.59
Os03t0563300-01	Rice	plastid	75.41	77.59
Bra013314.1-P	Field mustard	plastid	76.81	77.54
CDX78860	Canola	plastid	76.58	77.31
Bra012595.1-P	Field mustard	plastid	76.58	77.31
CDY55641	Canola	plastid	76.35	77.07
EES16721	Sorghum	plastid	76.11	77.01
CDY01542	Canola	plastid	76.81	76.81
GSMUA_Achr11P...	Banana	plastid	64.87	75.48
CDY50485	Canola	plastid	57.14	72.19
CDX87756	Canola	plastid	56.91	71.89
Bra022000.1-P	Field mustard	plastid	56.44	71.3
Zm00001d023536_P002	Maize	plastid	75.64	70.37
GSMUA_Achr6P21670_001	Banana	plastid	52.22	57.92

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	EntrezGene:102591731	Gene3D:3.40.50.300	MapMan:7.12.6.1.3	InterPro:AAA+_ATPase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016851
GO:GO:0016874	UniProt:M1CJ43	InterPro:Mg_chelatase_ATPase-isu	InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078
EnsemblPlantsGene:PGSC0003DMG400026627	PGSC:PGSC0003DMG400026627	EnsemblPlants:PGSC0003DMT400068480	PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	SMART:SM00382
SUPFAM:SSF52540	TIGRFAMs:TIGR02030	UniParc:UPI0002950D64	RefSeq:XP_006361060.1	SEG:seg	:

Description

Sulfur [Source:PGSC_GENE;Acc:PGSC0003DMG400026627]

Coordinates

chr10:+:4396290..4399466

Molecular Weight (calculated)

46404.7 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.210

Length

427 amino acids

Sequence
(BLAST)

001: MASLLGTSSS AAAAAILAST PFSSRSSKSA VLSLFPSSGH SQGRKFYGGI RLPVKKGRSQ FHVAISNVAT EISPAQEQAQ KLAEDSQRPV YPFPAIVGQD
101: EMKLCLLLNV IDPKIGGVMI MGDRGTGKST TVRSLVDLLP EIKVISGDPF NSDPEDQEVM SAEVRDKLRK GEQLPVSLTK INMVDLPLGA TEDRVCGTID
201: IEKALTEGVK AFEPGLLAKA NRGILYVDEV NLLDDHLVDV LLDSAASGWN TVEREGISIS HPARFILIGS GNPEEGELRP QLLDRFGMHA QVGTVRDAEL
301: RVKIVEERGR FDKNPKEFRE SYKGEQEKLQ SQITSARSGL SSVTIDHDLR VKISKVCAEL NVDGLRGDIV TNRAAKALAA LKGRDKVTPE DIATVIPNCL
401: RHRLRKDPLE SIDSGLLVVE KFYEVFG

Best Arabidopsis Sequence Match ( AT4G18480.1 )
(BLAST)

001: MASLLGTSSS AIWASPSLSS PSSKPSSSPI CFRPGKLFGS KLNAGIQIRP KKNRSRYHVS VMNVATEINS TEQVVGKFDS KKSARPVYPF AAIVGQDEMK
101: LCLLLNVIDP KIGGVMIMGD RGTGKSTTVR SLVDLLPEIN VVAGDPYNSD PIDPEFMGVE VRERVEKGEQ VPVIATKINM VDLPLGATED RVCGTIDIEK
201: ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDADLRVK
301: IVEERARFDS NPKDFRDTYK TEQDKLQDQI STARANLSSV QIDRELKVKI SRVCSELNVD GLRGDIVTNR AAKALAALKG KDRVTPDDVA TVIPNCLRHR
401: LRKDPLESID SGVLVSEKFA EIFS

Arabidopsis Description

CHLI1Magnesium-chelatase subunit ChlI-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P16127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.