Factsheet for GSMUA_Achr6P21670_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	59.22	62.13
TraesCS7A01G480700.1	Wheat	plastid	58.18	53.21
TraesCS7D01G467500.1	Wheat	plastid	57.66	52.86
KRH21317	Soybean	nucleus, plastid	57.66	52.73
KRH10981	Soybean	nucleus, plastid	57.66	52.73
KRH50153	Soybean	plastid	56.62	52.66
TraesCS7B01G382800.3	Wheat	plastid	57.4	52.62
EES16721	Sorghum	plastid	57.66	52.61
Os03t0563300-01	Rice	plastid	56.62	52.53
PGSC0003DMT400068480	Potato	plastid	57.92	52.22
Bra012595.1-P	Field mustard	plastid	57.14	52.01
CDY55641	Canola	plastid	57.14	52.01
Solyc10g008740.2.1	Tomato	plastid	57.66	51.99
VIT_10s0003g00890.t01	Wine grape	plastid	57.4	51.88
KRH20341	Soybean	plastid	56.62	51.78
AT5G45930.1	Thale cress	plastid	56.1	51.67
CDX78860	Canola	plastid	56.62	51.54
Bra013314.1-P	Field mustard	plastid	56.62	51.54
CDX99465	Canola	plastid	56.36	51.3
CDY01542	Canola	plastid	56.88	51.29
AT4G18480.1	Thale cress	plastid	56.1	50.94
Zm00001d023536_P002	Maize	plastid	57.4	48.15
CDY50485	Canola	plastid	35.32	40.24
CDX87756	Canola	plastid	35.06	39.94
Bra022000.1-P	Field mustard	plastid	35.06	39.94
GSMUA_Achr8P17100_001	Banana	plastid	28.05	29.59
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.04	0.97

Protein Annotations

Gene3D:3.40.50.300	MapMan:50.6.6	InterPro:AAA+_ATPase	InterPro:ATPase_dyneun-rel_AAA	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887
EnsemblPlantsGene:GSMUA_Achr6G21670_001	EnsemblPlants:GSMUA_Achr6P21670_001	EnsemblPlants:GSMUA_Achr6T21670_001	UniProt:M0T915	InterPro:P-loop_NTPase	PFAM:PF07728
PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002956A2A	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G21670_001]

Coordinates

chr6:-:18156408..18157814

Molecular Weight (calculated)

42081.7 Da

IEP (calculated)

10.358

GRAVY (calculated)

-0.305

Length

385 amino acids

Sequence
(BLAST)

001: MHRVGPTLGW SLKRAQLHIG IKGNRRLPSR SSYPTPLSSP ATHARLAGLP PSSHGGSARA LLPRPPRFQN SNPPHFSPQL HFPVSPLGIR SLFDKGTLSR
101: CITISFLASS SAGICHQRNL NGRARTAHKH RACRSLVSGA AATELTTAEE GKKLTIGESQ RPVFPFSSIV GQDEMKLCLL LNVIDPKIGG VMIMGDRGTG
201: KSTTVRSLVD LLPEIKVITM VDLPLGATED RVCGTIDIEK ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA
301: RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDAELRVK IVEERARFDR DPKGFRESYR AEQEKLQRQI TSARSSLASR GYRHQ

Best Arabidopsis Sequence Match ( AT5G45930.1 )
(BLAST)

001: MASLLGRSPS SILTCPRISS PSSTSSMSHL CFGPEKLSGR IQFNPKKNRS RYHVSVMNVA TEINSVEQAK KIDSKESARP VYPFAAIVGQ DEMKLCLLLN
101: VIDPKIGGVM IMGDRGTGKS TTVRSLVDLL PEITVVSGDP YNSDPRDPEC MGKEVREKVQ KGEELSVIET KINMVDLPLG ATEDRVCGTI DIEKALTEGV
201: KAFEPGLLAK ANRGILYVDE VNLLDDHLVD VLLDSAASGW NTVEREGISI SHPARFILIG SGNPEEGELR PQLLDRFGMH AQVGTVRDAE LRVKIVEERA
301: RFDSNPKEFR ETYQEEQLKL QEQITTARSN LSAVQIDQDL KVKISKVCAE LDVDGLRGDM VINRAARALA ALQGRDQVTA EDVGIVIPNC LRHRLRKDPL
401: ESMDSGILVT EKFYEVFT

Arabidopsis Description

CHLI2Magnesium-chelatase subunit ChlI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5XF33]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.