CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20341	Soybean	plastid	93.24	91.69
KRH21317	Soybean	nucleus, plastid	88.16	86.7
KRH10981	Soybean	nucleus, plastid	87.92	86.46
VIT_10s0003g00890.t01	Wine grape	plastid	84.54	82.16
Bra013314.1-P	Field mustard	plastid	80.43	78.72
CDX99465	Canola	plastid	80.43	78.72
CDX78860	Canola	plastid	80.19	78.49
PGSC0003DMT400068480	Potato	plastid	80.92	78.45
Bra012595.1-P	Field mustard	plastid	79.71	78.01
AT4G18480.1	Thale cress	plastid	79.71	77.83
CDY55641	Canola	plastid	79.47	77.78
Solyc10g008740.2.1	Tomato	plastid	80.19	77.75
AT5G45930.1	Thale cress	plastid	78.5	77.75
Os03t0563300-01	Rice	plastid	77.78	77.59
CDY01542	Canola	plastid	79.47	77.05
TraesCS7B01G382800.3	Wheat	plastid	77.54	76.43
TraesCS7D01G467500.1	Wheat	plastid	76.81	75.71
TraesCS7A01G480700.1	Wheat	plastid	76.81	75.53
EES16721	Sorghum	plastid	76.57	75.12
GSMUA_Achr11P...	Banana	plastid	66.18	74.66
CDY50485	Canola	plastid	59.66	73.08
CDX87756	Canola	plastid	59.18	72.49
Bra022000.1-P	Field mustard	plastid	59.18	72.49
Zm00001d023536_P002	Maize	plastid	77.54	69.93
GSMUA_Achr6P21670_001	Banana	plastid	52.66	56.62
KRH77667	Soybean	nucleus, plastid	33.09	18.27
KRH27819	Soybean	plastid	31.88	17.6

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	EntrezGene:100781940	Gene3D:3.40.50.300	MapMan:7.12.6.1.3	InterPro:AAA+_ATPase
EMBL:ACUP02004664	EnsemblPlantsGene:GLYMA_07G204300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015979
GO:GO:0015995	GO:GO:0016851	GO:GO:0016874	UniProt:I1KLS0	EnsemblPlants:KRH50153	ProteinID:KRH50153
ProteinID:KRH50153.1	InterPro:Mg_chelatase_ATPase-isu	InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PANTHER:PTHR32039
PANTHER:PTHR32039:SF9	MetaCyc:PWY-5531	MetaCyc:PWY-7159	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR02030
UniParc:UPI000233834C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:37332691..37335453

Molecular Weight (calculated)

45459.7 Da

IEP (calculated)

6.530

GRAVY (calculated)

-0.143

Length

414 amino acids

Sequence
(BLAST)

001: MASMFGTSSI AFLSSRYHSS QSLATNSPSL TTVQVFGRKF CGGNGFHGVK VTSVVATQLN SAQQAQKIAF NESQRPVYPF SAIVGQDEMK LCLLLNVIDP
101: KIGGVMIMGD RGTGKSTTVR SLVDLLPEIK VVAGDPYNSD PEDPEFMGVE VRERVIKGEQ LQVVFSKINM VDLPLGATED RVCGTIDIEK ALTEGVKAFE
201: PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDAELRVK IVEERARFDK
301: NPKVFRDSYK AEQEKLQQQI ASARSFLSSV QIDRDLKVKI SKVCAELNVD GLRGDIVTNR AAKALAALKG RDKVSAEDIA TVIPNCLRHR LRKDPLESID
401: SGLLVLEKFY EVFR

Best Arabidopsis Sequence Match ( AT4G18480.1 )
(BLAST)

001: MASLLGTSSS AIWASPSLSS PSSKPSSSPI CFRPGKLFGS KLNAGIQIRP KKNRSRYHVS VMNVATEINS TEQVVGKFDS KKSARPVYPF AAIVGQDEMK
101: LCLLLNVIDP KIGGVMIMGD RGTGKSTTVR SLVDLLPEIN VVAGDPYNSD PIDPEFMGVE VRERVEKGEQ VPVIATKINM VDLPLGATED RVCGTIDIEK
201: ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDADLRVK
301: IVEERARFDS NPKDFRDTYK TEQDKLQDQI STARANLSSV QIDRELKVKI SRVCSELNVD GLRGDIVTNR AAKALAALKG KDRVTPDDVA TVIPNCLRHR
401: LRKDPLESID SGVLVSEKFA EIFS

Arabidopsis Description

CHLI1Magnesium-chelatase subunit ChlI-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P16127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.