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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50485 Canola plastid 69.38 85.8
Bra022000.1-P Field mustard plastid 68.9 85.21
CDX87756 Canola plastid 68.42 84.62
AT4G18480.1 Thale cress plastid 83.25 82.08
KRH21317 Soybean nucleus, plastid 81.58 81.0
KRH10981 Soybean nucleus, plastid 81.58 81.0
VIT_10s0003g00890.t01 Wine grape plastid 80.38 78.87
KRH50153 Soybean plastid 77.75 78.5
KRH20341 Soybean plastid 77.75 77.2
Solyc10g008740.2.1 Tomato plastid 78.47 76.81
PGSC0003DMT400068480 Potato plastid 77.99 76.35
Os03t0563300-01 Rice plastid 74.4 74.94
TraesCS7D01G467500.1 Wheat plastid 74.16 73.81
EES16721 Sorghum plastid 74.16 73.46
TraesCS7B01G382800.3 Wheat plastid 73.68 73.33
TraesCS7A01G480700.1 Wheat plastid 73.21 72.68
GSMUA_Achr11P... Banana plastid 63.64 72.48
Zm00001d023536_P002 Maize plastid 73.68 67.1
GSMUA_Achr6P21670_001 Banana plastid 51.67 56.1
AT1G08520.1 Thale cress plastid 32.54 17.89
Protein Annotations
KEGG:00860+6.6.1.1Gene3D:1.10.8.80Gene3D:3.40.50.300MapMan:7.12.6.1.3EntrezGene:834633InterPro:AAA+_ATPase
ProteinID:AED95316.1ArrayExpress:AT5G45930EnsemblPlantsGene:AT5G45930RefSeq:AT5G45930TAIR:AT5G45930RefSeq:AT5G45930-TAIR-G
EnsemblPlants:AT5G45930.1TAIR:AT5G45930.1EMBL:AY140022Unigene:At.29985ProteinID:BAB09321.1EMBL:BT015783
Symbol:CHLI2ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009719
GO:GO:0009735GO:GO:0009987GO:GO:0010007GO:GO:0015979GO:GO:0015995GO:GO:0016787
GO:GO:0016851GO:GO:0016874GO:GO:0016887InterPro:Mg_chelatase_ATPase-isuInterPro:Mg_chelatse_chII_domRefSeq:NP_199405.2
InterPro:P-loop_NTPasePFAM:PF01078PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR32039PANTHER:PTHR32039:SF9UniProt:Q5XF33SMART:SM00382
SUPFAM:SSF52540TIGRFAMs:TIGR02030UniParc:UPI0000197050SEG:seg::
Description
CHLI2Magnesium-chelatase subunit ChlI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5XF33]
Coordinates
chr5:+:18627950..18629697
Molecular Weight (calculated)
46100.4 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.267
Length
418 amino acids
Sequence
(BLAST)
001: MASLLGRSPS SILTCPRISS PSSTSSMSHL CFGPEKLSGR IQFNPKKNRS RYHVSVMNVA TEINSVEQAK KIDSKESARP VYPFAAIVGQ DEMKLCLLLN
101: VIDPKIGGVM IMGDRGTGKS TTVRSLVDLL PEITVVSGDP YNSDPRDPEC MGKEVREKVQ KGEELSVIET KINMVDLPLG ATEDRVCGTI DIEKALTEGV
201: KAFEPGLLAK ANRGILYVDE VNLLDDHLVD VLLDSAASGW NTVEREGISI SHPARFILIG SGNPEEGELR PQLLDRFGMH AQVGTVRDAE LRVKIVEERA
301: RFDSNPKEFR ETYQEEQLKL QEQITTARSN LSAVQIDQDL KVKISKVCAE LDVDGLRGDM VINRAARALA ALQGRDQVTA EDVGIVIPNC LRHRLRKDPL
401: ESMDSGILVT EKFYEVFT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.