Factsheet for GSMUA_Achr11P12270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50153	Soybean	plastid	74.66	66.18
EES16721	Sorghum	plastid	74.93	65.17
PGSC0003DMT400068480	Potato	plastid	75.48	64.87
KRH20341	Soybean	plastid	74.39	64.85
KRH10981	Soybean	nucleus, plastid	74.39	64.85
Os03t0563300-01	Rice	plastid	73.3	64.82
KRH21317	Soybean	nucleus, plastid	74.11	64.61
TraesCS7D01G467500.1	Wheat	plastid	73.84	64.52
Solyc10g008740.2.1	Tomato	plastid	74.93	64.4
TraesCS7B01G382800.3	Wheat	plastid	73.57	64.29
TraesCS7A01G480700.1	Wheat	plastid	73.57	64.13
VIT_10s0003g00890.t01	Wine grape	plastid	74.39	64.08
AT5G45930.1	Thale cress	plastid	72.48	63.64
CDY55641	Canola	plastid	72.75	63.12
CDX78860	Canola	plastid	72.75	63.12
Bra012595.1-P	Field mustard	plastid	72.75	63.12
CDX99465	Canola	plastid	72.48	62.88
Bra013314.1-P	Field mustard	plastid	72.48	62.88
CDY01542	Canola	plastid	72.48	62.3
AT4G18480.1	Thale cress	plastid	71.93	62.26
GSMUA_Achr6P21670_001	Banana	plastid	62.13	59.22
Zm00001d023536_P002	Maize	plastid	73.3	58.61
CDY50485	Canola	plastid	49.86	54.14
CDX87756	Canola	plastid	49.59	53.85
Bra022000.1-P	Field mustard	plastid	49.05	53.25
GSMUA_Achr8P17100_001	Banana	plastid	31.61	31.78
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	4.63	4.12

Protein Annotations

EnsemblPlants:GSMUA_Achr11P12270_001	EnsemblPlants:GSMUA_Achr11T12270_001	EnsemblPlantsGene:GSMUA_Achr11G12270_001	Gene3D:1.10.8.80	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	PFAM:PF01078
SEG:seg	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000294D0B7	UniProt:M0RRK7	MapMan:7.12.6.1.3

Description

Magnesium-chelatase subunit chlI, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G12270_001]

Coordinates

chr11:+:11276430..11280537

Molecular Weight (calculated)

39736.1 Da

IEP (calculated)

9.246

GRAVY (calculated)

-0.118

Length

367 amino acids

Sequence
(BLAST)

001: MAGLLSSSFT ALSAPRARVV HRRNLSSGAR ISIRHRPRHL LVSGAAAATT ELSSADEGKK LMSSESQRPV FPFSAIVGQD EMKLCLLLNV IDPKIGGVMI
101: MGDRGTGKST VVRSLVDLLP EIKPLPVAAT RITMVDLPLG ATEDRVCGTI DIEKALTEGV KAFEPGLLAK ANRGILYVDE VNLLDDHLVD VLLDSAASGW
201: NTVEREGISI SHPARFILIG SGNPEEGELR PQLLDRFGMH AQVGTVRDAE LRVKIVEERA GFDQDPKGFR ETYRAEQEKL QQQIASARSS LASVQIDHDL
301: RVKISKVCAE LNVDGLRGDI VSNRAAKALA ALKGRDKVTA EDIATLSIHS KRLSCRASRF TKIKGNV

Best Arabidopsis Sequence Match ( AT5G45930.1 )
(BLAST)

001: MASLLGRSPS SILTCPRISS PSSTSSMSHL CFGPEKLSGR IQFNPKKNRS RYHVSVMNVA TEINSVEQAK KIDSKESARP VYPFAAIVGQ DEMKLCLLLN
101: VIDPKIGGVM IMGDRGTGKS TTVRSLVDLL PEITVVSGDP YNSDPRDPEC MGKEVREKVQ KGEELSVIET KINMVDLPLG ATEDRVCGTI DIEKALTEGV
201: KAFEPGLLAK ANRGILYVDE VNLLDDHLVD VLLDSAASGW NTVEREGISI SHPARFILIG SGNPEEGELR PQLLDRFGMH AQVGTVRDAE LRVKIVEERA
301: RFDSNPKEFR ETYQEEQLKL QEQITTARSN LSAVQIDQDL KVKISKVCAE LDVDGLRGDM VINRAARALA ALQGRDQVTA EDVGIVIPNC LRHRLRKDPL
401: ESMDSGILVT EKFYEVFT

Arabidopsis Description

CHLI2Magnesium-chelatase subunit ChlI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5XF33]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.