Factsheet for GSMUA_Achr8P17100_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0965g00010.t01	Wine grape	plastid	21.64	56.03
EER93223	Sorghum	plastid	70.96	34.3
Os03t0811100-01	Rice	plastid	70.41	34.08
Zm00001d013013_P003	Maize	plastid	70.14	33.91
CDX95054	Canola	plastid	69.59	33.69
CDX93557	Canola	plastid	69.59	33.6
Solyc04g015490.2.1	Tomato	nucleus, plastid	70.41	33.55
TraesCS5A01G466100.1	Wheat	plastid	69.86	33.51
Bra018619.1-P	Field mustard	plastid	69.04	33.33
KRH77667	Soybean	nucleus, plastid	67.67	32.93
TraesCS5B01G477800.1	Wheat	plastid	68.49	32.85
KRH27819	Soybean	plastid	67.4	32.8
AT1G08520.1	Thale cress	plastid	67.67	32.5
GSMUA_Achr11P...	Banana	plastid	31.78	31.61
TraesCS5D01G478900.1	Wheat	plastid	68.22	30.55
VIT_06s0061g00010.t01	Wine grape	cytosol	49.59	29.92
GSMUA_Achr6P21670_001	Banana	plastid	29.59	28.05
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.1	0.97

Protein Annotations

EnsemblPlants:GSMUA_Achr8P17100_001	EnsemblPlants:GSMUA_Achr8T17100_001	EnsemblPlantsGene:GSMUA_Achr8G17100_001	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:Mg_chelatse_chII_dom
InterPro:P-loop_NTPase	PANTHER:PTHR43473	PANTHER:PTHR43473:SF2	PFAM:PF01078	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000294C64B	UniProt:M0TR63	MapMan:7.12.6.1.1	:	:

Description

Magnesium-chelatase subunit chlD, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G17100_001]

Coordinates

chr8:+:16019633..16032225

Molecular Weight (calculated)

39362.3 Da

IEP (calculated)

5.051

GRAVY (calculated)

-0.010

Length

365 amino acids

Sequence
(BLAST)

001: MAAAAAAASS FILSKSIIFP SSFRPLLPST KRSVCPRKAA AGRPSPRRFI VASAAATIDS SNGAVSATEQ KPIDSAEYGR QFFPLAAVVG QDAIKTALLL
101: GAIDREIGGI AISGKRGTAK TVMARGLHAM LPPIEVVAGS ISNADPNRPE EWEDGLAERV EYDSAGNIKT QIVRTPFLQI PLGVTEDRLI GSVDVEESIK
201: SGTTAFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNVVEREG ISFQHPCKPL LIATYNPEEG SVREHLLDRI AINLSADLPM NLDDRVAAVG
301: VATKFQETSK EVFKIAEEET EYAKTQIILA REYLKDVTIT REQLKYLVME SIRGGCQVHN LELIS

Best Arabidopsis Sequence Match ( AT1G08520.1 )
(BLAST)

001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS

Arabidopsis Description

CHLDMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A178W355]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.