Factsheet for Os03t0811100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93223	Sorghum	plastid	87.4	87.28
Zm00001d013013_P003	Maize	plastid	86.34	86.23
VIT_06s0061g00010.t01	Wine grape	cytosol	68.3	85.12
TraesCS5B01G477800.1	Wheat	plastid	84.08	83.31
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	45.49	83.05
TraesCS5A01G466100.1	Wheat	plastid	83.29	82.52
KRH77667	Soybean	nucleus, plastid	78.38	78.8
KRH27819	Soybean	plastid	78.12	78.53
Solyc04g015490.2.1	Tomato	nucleus, plastid	79.18	77.94
Bra018619.1-P	Field mustard	plastid	77.85	77.65
CDX95054	Canola	plastid	77.59	77.59
CDX93557	Canola	plastid	77.72	77.51
TraesCS5D01G478900.1	Wheat	plastid	83.42	77.18
AT1G08520.1	Thale cress	plastid	77.72	77.11
GSMUA_Achr8P17100_001	Banana	plastid	34.08	70.41
VIT_00s0965g00010.t01	Wine grape	plastid	10.61	56.74
Os03t0563300-01	Rice	plastid	17.9	32.53
Os03t0811300-01	Rice	plasma membrane	3.85	18.01

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	Gene3D:3.40.50.410	EntrezGene:4334537	MapMan:7.12.6.1.1
InterPro:AAA+_ATPase	ProteinID:AAP73850.1	ProteinID:AAT77900.1	ProteinID:ABF99490.1	ProteinID:ABK58606.1	EMBL:AK072463
ProteinID:BAF13582.1	ProteinID:BAS87000.1	ProteinID:EEE60156.1	EMBL:EF065605	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016851	GO:GO:0016874	InterPro:IPR002035	InterPro:IPR036465	InterPro:Mg_chelatase_ATPase-dsu	InterPro:Mg_chelatse_chII_dom
EnsemblPlantsGene:Os03g0811100	EnsemblPlants:Os03t0811100-01	InterPro:P-loop_NTPase	PFAM:PF01078	PFAM:PF13519	PFscan:PS50234
PANTHER:PTHR43473	PANTHER:PTHR43473:SF2	UniProt:Q6ATS0	SMART:SM00327	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF53300	TIGRFAMs:TIGR02031	UniParc:UPI00003FE6B9	InterPro:VWF_A	RefSeq:XP_015631084.1	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

magnesium chelatase subunit ChlD, magnesium-chelatase ChlD subunit, yellow-green leaf mutant 98, yellow-green leaf 7, magnesium-chelatase ChlD proteinMagnesium-chelatase subunit ChlD, Chlorophyll synthesis, Chloroplast development (Os03t0811100-01);Similar to Chloroplast Mg-chelatase subunit XANTHA-G. (Os03t0811100-02)

Coordinates

chr3:+:33955293..33961962

Molecular Weight (calculated)

81883.7 Da

IEP (calculated)

5.159

GRAVY (calculated)

-0.316

Length

754 amino acids

Sequence
(BLAST)

001: MAMATTALSA SLPRLLPPRR RRFPTPSSSS PSAASTSTSR VVRLRAAAAS APSEVLDSTN GAIPSGKGGG GQQYGREYFP LAAVVGQDAI KTALLLGAID
101: REIGGIAISG KRGTAKTVMA RGLHAMLPPI EVVVGSIANA DPNYPEEWEE GLANQVQYDA DGNLKTEIIK TPFVQIPLGI TEDRLIGSVD VEASVKSGTT
201: VFQPGLLAEA HRGVLYVDEI NLLDEGVSNL LLNVLTEGVN IVEREGISFR HPCKPLLIAT YNPEEGSVRE HLLDRIAINL SADLPMSFDD RVAAVDIATQ
301: FQESSKEVFK MVEEETEVAK TQIILAREYL KDVAISTEQL KYLVMEAIRG GCQGHRAELY AARVAKCLAA MEGREKVYVD DLKKAVELVI LPRSILSDNP
401: QEQQDQQPPP PPPPPPPQDQ DSQEDQDEDE EEDQEDDDEE NEQQDQQIPE EFIFDAEGGI VDEKLLFFAQ QAQRRRGKAG RAKNLIFSSD RGRYIGSMLP
501: KGPIRRLAVD ATLRAAAPYQ KLRREKDRDK TRKVFVEKTD MRAKRMARKA GALVIFVVDA SGSMALNRMQ NAKGAALKLL AESYTSRDQV SIIPFRGDFA
601: EVLLPPSRSI AMARNRLEKL PCGGGSPLAH GLSTAVRVGL NAEKSGDVGR IMIVAITDGR ANVSLKKSTD PEATSDAPRP SSQELKDEIL EVAGKIYKAG
701: ISLLVIDTEN KFVSTGFAKE IARVAQGKYY YLPNASDAVI SAATKTALSD LKSS

Best Arabidopsis Sequence Match ( AT1G08520.1 )
(BLAST)

001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS

Arabidopsis Description

CHLDMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A178W355]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.