Factsheet for Bra018619.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93557	Canola	plastid	99.47	99.47
CDX95054	Canola	plastid	97.88	98.14
AT1G08520.1	Thale cress	plastid	89.55	89.08
VIT_06s0061g00010.t01	Wine grape	cytosol	71.16	88.93
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	45.37	83.05
KRH77667	Soybean	nucleus, plastid	78.31	78.93
KRH27819	Soybean	plastid	78.17	78.8
Solyc04g015490.2.1	Tomato	nucleus, plastid	79.23	78.2
Os03t0811100-01	Rice	plastid	77.65	77.85
Zm00001d013013_P003	Maize	plastid	77.51	77.62
EER93223	Sorghum	plastid	77.25	77.35
TraesCS5B01G477800.1	Wheat	plastid	76.85	76.35
TraesCS5A01G466100.1	Wheat	plastid	76.72	76.22
TraesCS5D01G478900.1	Wheat	plastid	77.38	71.78
GSMUA_Achr8P17100_001	Banana	plastid	33.33	69.04
VIT_00s0965g00010.t01	Wine grape	plastid	10.05	53.9
Bra012595.1-P	Field mustard	plastid	17.99	32.15
Bra013314.1-P	Field mustard	plastid	17.33	30.97
Bra022000.1-P	Field mustard	plastid	12.3	27.51

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	Gene3D:3.40.50.410	MapMan:7.12.6.1.1	InterPro:AAA+_ATPase
EnsemblPlantsGene:Bra018619	EnsemblPlants:Bra018619.1	EnsemblPlants:Bra018619.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016851	GO:GO:0016874	InterPro:IPR002035	InterPro:IPR036465	UniProt:M4DQ28	InterPro:Mg_chelatase_ATPase-dsu
InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PFAM:PF13519	PFscan:PS50234	PANTHER:PTHR43473
PANTHER:PTHR43473:SF2	SMART:SM00327	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF53300	TIGRFAMs:TIGR02031
UniParc:UPI000253E796	InterPro:VWF_A	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

AT1G08520 (E=0.0) PDE166, CHLD | CHLD; ATP binding / magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA06:+:2943440..2947224

Molecular Weight (calculated)

82584.7 Da

IEP (calculated)

5.181

GRAVY (calculated)

-0.322

Length

756 amino acids

Sequence
(BLAST)

001: MAMTPVAASS PASTYRLFRP DFIIPKPPFL SLPTKRNRVP SHRFTVRASA NAIVESPNGA AASSSDIDSS DYGRKFFPLA AVVGQEGIKT ALLLGAVDRE
101: IGGIAISGRR GTAKTIMARG LHAILPPIEV VVGSISNADP ACPDEWEDEL AEKVEYNADN TVKTEIVKSP FIQIPLGVTE DRLIGSVDVE ESVKRGTTVF
201: QPGLLAEAHR GVLYVDEINL LDEGISNLLL NVLTDGVNIV EREGISFRHP CKPLLIATYN PEEGAVREHL LDRVAINLSA DLPMSFEDRV AAVGIATQFQ
301: ERSNEVFRMV DEETETAKTQ IILAREYLKD VKITKDQLKY LVLEAMRGGC QGHRAELYAA RVAKCLAALE GREKVTIDDL RKAVELVILP RSDVVENPPP
401: DQENQPPPPP PPPQSNDAGE EQNEEDQEEQ EEEDENNEEN ENEQQQDQIP EEFIFDAEGG LVDEKLLFFA QQAQRRKGKA GRAKNVIFSE DRGRYIKPML
501: PKGPVKRLAV DATLRAAAPY QKLRREKDIS GTRKVFVEKT DMRAKRMARK AGALVIFVVD ASGSMALNRM QNAKGAALKL LAESYTSRDQ VAIIPFRGDA
601: AEVLLPPSRS IAMARNRLER LPCGGGSPLA HGLTTAVRVG LNAEKSGDVG RIMIVAITDG RANITLKRST DPEGIAPDAP RPSSQELKDE ILEVAGKIYK
701: AGMSLLVIDT ENKFVSTGFA KEIARVAQGK YYYLPNASDA VISATTKDAL SALKNS

Best Arabidopsis Sequence Match ( AT1G08520.1 )
(BLAST)

001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS

Arabidopsis Description

CHLDMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A178W355]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.