Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P17110_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 57.69 | 84.5 |
KRH77667 | Soybean | nucleus, plastid | 88.43 | 71.33 |
Bra018619.1-P | Field mustard | plastid | 88.93 | 71.16 |
CDX95054 | Canola | plastid | 88.59 | 71.09 |
CDX93557 | Canola | plastid | 88.76 | 71.03 |
KRH27819 | Soybean | plastid | 87.93 | 70.93 |
Solyc04g015490.2.1 | Tomato | nucleus, plastid | 88.59 | 69.97 |
EER93223 | Sorghum | plastid | 86.78 | 69.54 |
AT1G08520.1 | Thale cress | plastid | 87.11 | 69.34 |
Zm00001d013013_P003 | Maize | plastid | 86.28 | 69.14 |
Os03t0811100-01 | Rice | plastid | 85.12 | 68.3 |
TraesCS5A01G466100.1 | Wheat | plastid | 84.79 | 67.41 |
TraesCS5B01G477800.1 | Wheat | plastid | 84.79 | 67.41 |
TraesCS5D01G478900.1 | Wheat | plastid | 84.79 | 62.94 |
GSMUA_Achr8P17100_001 | Banana | plastid | 29.92 | 49.59 |
VIT_10s0003g00890.t01 | Wine grape | plastid | 14.88 | 21.13 |
VIT_00s0965g00010.t01 | Wine grape | plastid | 0.0 | 0.0 |
Protein Annotations
KEGG:00860+6.6.1.1 | Gene3D:1.10.8.80 | EntrezGene:100243048 | wikigene:100243048 | Gene3D:3.40.50.300 | Gene3D:3.40.50.410 |
MapMan:7.12.6.1.1 | ProteinID:CBI17197 | ProteinID:CBI17197.3 | ncoils:Coil | UniProt:D7SNG8 | EMBL:FN594957 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0015995 | GO:GO:0016851 |
GO:GO:0016874 | InterPro:IPR002035 | InterPro:IPR036465 | EntrezGene:LOC100243048 | wikigene:LOC100243048 | InterPro:Mg_chelatase_ATPase-dsu |
InterPro:Mg_chelatse_chII_dom | InterPro:P-loop_NTPase | PFAM:PF01078 | PFAM:PF13519 | PFscan:PS50234 | PANTHER:PTHR43473 |
PANTHER:PTHR43473:SF2 | SMART:SM00327 | SUPFAM:SSF52540 | SUPFAM:SSF53300 | TIGRFAMs:TIGR02031 | UniParc:UPI0001BE0FB2 |
ArrayExpress:VIT_06s0061g00010 | EnsemblPlantsGene:VIT_06s0061g00010 | EnsemblPlants:VIT_06s0061g00010.t01 | InterPro:VWF_A | unigene:Vvi.16357 | RefSeq:XP_002274874 |
RefSeq:XP_002274874.2 | SEG:seg | InterPro:vWFA_dom_sf | : | : | : |
Description
Mg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:D7SNG8]
Coordinates
chr6:+:17213987..17224620
Molecular Weight (calculated)
66620.6 Da
IEP (calculated)
5.246
GRAVY (calculated)
-0.379
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: WEDGLAEQVE YDSAGNIKTQ IVRSPFVQIP LGVTEDRLVG SVDVEESVKT GTTVFQPGLL AEAHRGVLYV DEINLLDEGI SNLLLNVLAE GVNIVEREGI
101: SFRHPCKPLL IATYNPEEGA VREHLLDRVA INLSADLPMS FEDRVAAVGI ATQFQERSNE VFQMVEEETE YAKTQIILAR EYLKDVSISR DQLKYLVMEA
201: LRGGCQGHRA ELYAARVAKC LTALEGREKV NVDDLKKAVE LVILPRSIIN ENPPDQQNQQ PPPPPPPPQN EDSGEEQNEE ENQEDENDKE NEQQEQIPEE
301: FIFDAEGGLV DEKLLFFAQQ AQRRRGRAGR AKNVIFSEDR GRYIKPMLPK GPVKRLAVDA TLRAAAPYQK LRREKNAQKG RKVFVEKTDM RAKRMARKAG
401: ALVIFVVDAS GSMALNRMQN AKGAALKLLA ESYTSRDQVA IIPFRGDSAE VLLPPSRSIA MARKRLERLP CGGGSPLAHG LTTAVRVGLN AEKSGDVGRV
501: MIVAITDGRA NISLKRSTDP EAAAAADAPR PSAQELKDEI LEVAGKIYKA GMSLLVIDTE NKFVSTGFAK EIARIAQGKY YYLPNASDAV ISATTKEALS
601: VLKNS
101: SFRHPCKPLL IATYNPEEGA VREHLLDRVA INLSADLPMS FEDRVAAVGI ATQFQERSNE VFQMVEEETE YAKTQIILAR EYLKDVSISR DQLKYLVMEA
201: LRGGCQGHRA ELYAARVAKC LTALEGREKV NVDDLKKAVE LVILPRSIIN ENPPDQQNQQ PPPPPPPPQN EDSGEEQNEE ENQEDENDKE NEQQEQIPEE
301: FIFDAEGGLV DEKLLFFAQQ AQRRRGRAGR AKNVIFSEDR GRYIKPMLPK GPVKRLAVDA TLRAAAPYQK LRREKNAQKG RKVFVEKTDM RAKRMARKAG
401: ALVIFVVDAS GSMALNRMQN AKGAALKLLA ESYTSRDQVA IIPFRGDSAE VLLPPSRSIA MARKRLERLP CGGGSPLAHG LTTAVRVGLN AEKSGDVGRV
501: MIVAITDGRA NISLKRSTDP EAAAAADAPR PSAQELKDEI LEVAGKIYKA GMSLLVIDTE NKFVSTGFAK EIARIAQGKY YYLPNASDAV ISATTKEALS
601: VLKNS
001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS
Arabidopsis Description
CHLDMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A178W355]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.