CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018619.1-P	Field mustard	plastid	98.14	97.88
CDX93557	Canola	plastid	97.88	97.62
VIT_06s0061g00010.t01	Wine grape	cytosol	71.09	88.59
AT1G08520.1	Thale cress	plastid	89.26	88.55
GSMUA_Achr8P17110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	45.62	83.29
KRH77667	Soybean	nucleus, plastid	78.12	78.53
KRH27819	Soybean	plastid	77.98	78.4
Solyc04g015490.2.1	Tomato	nucleus, plastid	79.44	78.2
Zm00001d013013_P003	Maize	plastid	77.85	77.75
Os03t0811100-01	Rice	plastid	77.59	77.59
EER93223	Sorghum	plastid	77.45	77.35
TraesCS5B01G477800.1	Wheat	plastid	77.06	76.35
TraesCS5A01G466100.1	Wheat	plastid	76.92	76.22
TraesCS5D01G478900.1	Wheat	plastid	77.45	71.66
GSMUA_Achr8P17100_001	Banana	plastid	33.69	69.59
VIT_00s0965g00010.t01	Wine grape	plastid	10.08	53.9
CDY55641	Canola	plastid	17.9	31.91
CDY01542	Canola	plastid	17.77	31.38
CDX99465	Canola	plastid	17.37	30.97
CDX78860	Canola	plastid	17.24	30.73
CDY50485	Canola	plastid	12.73	28.4
CDX87756	Canola	plastid	12.47	27.81

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	Gene3D:3.40.50.410	MapMan:7.12.6.1.1	GO:A0A078E3F9
InterPro:AAA+_ATPase	EnsemblPlants:CDX95054	ProteinID:CDX95054	ProteinID:CDX95054.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015995	GO:GO:0016851	EnsemblPlantsGene:GSBRNA2T00100574001	InterPro:IPR002035
InterPro:IPR036465	InterPro:Mg_chelatase_ATPase-dsu	InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PFAM:PF13519
PFscan:PS50234	PANTHER:PTHR43473	PANTHER:PTHR43473:SF2	MetaCyc:PWY-5531	MetaCyc:PWY-7159	SMART:SM00327
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF53300	TIGRFAMs:TIGR02031	UniParc:UPI0004EF0747	InterPro:VWF_A
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

BnaC05g06170D

Coordinates

chrLK031886:-:894255..899809

Molecular Weight (calculated)

82317.3 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.308

Length

754 amino acids

Sequence
(BLAST)

001: MAMTAVAASS PVSTYRLFRP DFIPKPPFLS FTTKRSRAAS HRFTVRASAN AIVESPNGVA ASSSDIDSSD YGRKFFPLAA VVGQEGIKTA LLLGAVDREI
101: GGIAISGRRG TAKTIMARGL HAILPPIEVV VGSISNADPA CPDEWEDELA EKVEYNADNT VKTEIVKSPF IQIPLGVTED RLIGSVDVEE SVKRGTTVFQ
201: PGLLAEAHRG VLYVDEINLL DEGISNLLLN VLTDGVNIVE REGISFRHPC KPLLIATYNP EEGAVREHLL DRVAINLSAD LPMSFEDRVA AVGIATQFQE
301: RSDEVFRMVD EETETAKTQI ILAREYLKDV KITKDQLKYL VLEAMRGGCQ GHRAELYAAR VAKCLAALEG REKVTIDDLR KAVELVILPR SDVVENPPPD
401: QENQPPPPPP PPQSNDAGEE QNEEDQEEEE EDENNEENEN EQQQDQIPDE FIFDAEGGLV DEKLLFFAQQ AQRRKGKAGR AKNVIFSEDR GRYIKPMLPK
501: GPVKRLAVDA TLRAAAPYQK LRREKDISGT RKVFVEKTDM RAKRMARKAG ALVIFVVDAS GSMALNRMQN AKGAALKLLA ESYTSRDQVA IIPFRGDAAE
601: VLLPPSRSIA MARNRLERLP CGGGSPLAHG LTTAVRVGLN AEKSGDVGRI MIVAITDGRA NITLKRSTDP EGIAPDAPRP SSQELKDEIL EVAGKIYKAG
701: MSLLVIDTEN KFVSTGFAKE IARVAQGKYY YLPNASDAVI SATTKDALSA LKNS

Best Arabidopsis Sequence Match ( AT1G08520.1 )
(BLAST)

001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS

Arabidopsis Description

CHLDMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL;Acc:A0A178W355]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.