Factsheet for Bra022000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50485	Canola	plastid	98.82	98.82
AT5G45930.1	Thale cress	plastid	85.21	68.9
Bra012595.1-P	Field mustard	plastid	78.7	62.88
Bra013314.1-P	Field mustard	plastid	78.7	62.88
KRH21317	Soybean	nucleus, plastid	76.33	61.28
KRH10981	Soybean	nucleus, plastid	75.74	60.81
KRH50153	Soybean	plastid	72.49	59.18
VIT_10s0003g00890.t01	Wine grape	plastid	74.26	58.92
Solyc10g008740.2.1	Tomato	plastid	71.89	56.91
KRH20341	Soybean	plastid	70.71	56.77
PGSC0003DMT400068480	Potato	plastid	71.3	56.44
Os03t0563300-01	Rice	plastid	67.75	55.18
EES16721	Sorghum	plastid	68.64	54.98
TraesCS7B01G382800.3	Wheat	plastid	67.75	54.52
TraesCS7D01G467500.1	Wheat	plastid	67.75	54.52
TraesCS7A01G480700.1	Wheat	plastid	67.75	54.39
Zm00001d023536_P002	Maize	plastid	67.16	49.46
GSMUA_Achr11P...	Banana	plastid	53.25	49.05
GSMUA_Achr6P21670_001	Banana	plastid	39.94	35.06
Bra018619.1-P	Field mustard	plastid	27.51	12.3

Protein Annotations

Gene3D:1.10.8.80	Gene3D:3.40.50.300	MapMan:50.6.6	EnsemblPlantsGene:Bra022000	EnsemblPlants:Bra022000.1	EnsemblPlants:Bra022000.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0015995	GO:GO:0016787
GO:GO:0016887	UniProt:M4DZQ3	InterPro:P-loop_NTPase	PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	SUPFAM:SSF52540
UniParc:UPI0002545B6E	SEG:seg	:	:	:	:

Description

AT5G45930 (E=9e-076) CHLI2, CHL I2, CHLI-2 | CHLI2 (MAGNESIUM CHELATASE I2); ATPase/ magnesium chelatase

Coordinates

chrA02:+:18356580..18358040

Molecular Weight (calculated)

37545.3 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.346

Length

338 amino acids

Sequence
(BLAST)

001: MVSLLGTSPS SILSCPRLSS TPLTSPVCFR PGNTFGGKLY RRIQSETKKS RSRHHVLVTN VATGINSIEQ AKKIDTKESA RPVYPFAAIV GQDEMNLCLL
101: LNVIDPKIGG VMIMGDRGTG KSTTVRSLVD LLPEITVVAG DPYNSDPRDP EFMGKEVRER VQKGEELDVM ETKINMVDLP LGNPEEGELR PQLLDRFGMH
201: AQVGTVRDAE LRVKIVEERA RFDSNPKEFR ESYLEEQMKL QEQITSARSN LSGVEINQDL KVKISRVCAE LDVDGLRGDI VTNRAARALA ALKGRDHVTA
301: EDVGIVIPNC LRHRLRKDPL ESMDSGIVVT EKFYEVFS

Best Arabidopsis Sequence Match ( AT5G45930.1 )
(BLAST)

001: MASLLGRSPS SILTCPRISS PSSTSSMSHL CFGPEKLSGR IQFNPKKNRS RYHVSVMNVA TEINSVEQAK KIDSKESARP VYPFAAIVGQ DEMKLCLLLN
101: VIDPKIGGVM IMGDRGTGKS TTVRSLVDLL PEITVVSGDP YNSDPRDPEC MGKEVREKVQ KGEELSVIET KINMVDLPLG ATEDRVCGTI DIEKALTEGV
201: KAFEPGLLAK ANRGILYVDE VNLLDDHLVD VLLDSAASGW NTVEREGISI SHPARFILIG SGNPEEGELR PQLLDRFGMH AQVGTVRDAE LRVKIVEERA
301: RFDSNPKEFR ETYQEEQLKL QEQITTARSN LSAVQIDQDL KVKISKVCAE LDVDGLRGDM VINRAARALA ALQGRDQVTA EDVGIVIPNC LRHRLRKDPL
401: ESMDSGILVT EKFYEVFT

Arabidopsis Description

CHLI2Magnesium-chelatase subunit ChlI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5XF33]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.