Factsheet for Bra013314.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78860	Canola	plastid	99.76	99.76
Bra012595.1-P	Field mustard	plastid	94.8	94.8
AT4G18480.1	Thale cress	plastid	94.33	94.1
KRH21317	Soybean	nucleus, plastid	82.51	82.9
KRH10981	Soybean	nucleus, plastid	82.03	82.42
KRH50153	Soybean	plastid	78.72	80.43
VIT_10s0003g00890.t01	Wine grape	plastid	79.91	79.34
Bra022000.1-P	Field mustard	plastid	62.88	78.7
KRH20341	Soybean	plastid	77.78	78.15
PGSC0003DMT400068480	Potato	plastid	77.54	76.81
Solyc10g008740.2.1	Tomato	plastid	77.07	76.35
Os03t0563300-01	Rice	plastid	74.23	75.66
TraesCS7D01G467500.1	Wheat	plastid	73.76	74.29
TraesCS7B01G382800.3	Wheat	plastid	73.52	74.05
TraesCS7A01G480700.1	Wheat	plastid	73.52	73.87
EES16721	Sorghum	plastid	73.52	73.7
GSMUA_Achr11P...	Banana	plastid	62.88	72.48
Zm00001d023536_P002	Maize	plastid	74.23	68.41
GSMUA_Achr6P21670_001	Banana	plastid	51.54	56.62
Bra018619.1-P	Field mustard	plastid	30.97	17.33

Protein Annotations

KEGG:00860+6.6.1.1	Gene3D:1.10.8.80	Gene3D:3.40.50.300	MapMan:7.12.6.1.3	InterPro:AAA+_ATPase	EnsemblPlantsGene:Bra013314
EnsemblPlants:Bra013314.1	EnsemblPlants:Bra013314.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015979	GO:GO:0015995	GO:GO:0016851	GO:GO:0016874	UniProt:M4DA04	InterPro:Mg_chelatase_ATPase-isu
InterPro:Mg_chelatse_chII_dom	InterPro:P-loop_NTPase	PFAM:PF01078	PANTHER:PTHR32039	PANTHER:PTHR32039:SF9	SMART:SM00382
SUPFAM:SSF52540	TIGRFAMs:TIGR02030	UniParc:UPI0002546092	SEG:seg	:	:

Description

AT4G18480 (E=3e-187) CHLI1, CH42, CH-42, CHL11, CHLI-1 | CHLI1; ATPase/ magnesium chelatase

Coordinates

chrA01:-:4926449..4927928

Molecular Weight (calculated)

45976.2 Da

IEP (calculated)

6.416

GRAVY (calculated)

-0.212

Length

423 amino acids

Sequence
(BLAST)

001: MASLLGTSSS AICASHSLSS SSSTPSISPI CFKPGKICGG KLNAGIQIRP KKNRSRHHLS VVNVATEINS TEQVGKFDSK KSARPVYPFA AIVGQDEMKL
101: CLLLNVIDPK IGGVMIMGDR GTGKSTTVRS LVDLLPEIKV VAGDPYNSDP LDPEFMGVEV RERVERGEQV PVVATKINMV DLPLGATEDR VCGTIDIEKA
201: LTEGVKAFEP GLLAKANRGI LYVDEVNLLD DHLVDVLLDS AASGWNTVER EGISISHPAR FILIGSGNPE EGELRPQLLD RFGMHAQVGT VRDADLRVKI
301: VEERARFDSN PQDFRETYKT EQDKLQDQIS NARSNLSSVQ IDRELKVKIS KVCSELNVDG LRGDIVTNRA AKALAALKGK DRVTADDVAT VIPNCLRHRL
401: RKDPLESIDS GVLVSEKFAE VFS

Best Arabidopsis Sequence Match ( AT4G18480.1 )
(BLAST)

001: MASLLGTSSS AIWASPSLSS PSSKPSSSPI CFRPGKLFGS KLNAGIQIRP KKNRSRYHVS VMNVATEINS TEQVVGKFDS KKSARPVYPF AAIVGQDEMK
101: LCLLLNVIDP KIGGVMIMGD RGTGKSTTVR SLVDLLPEIN VVAGDPYNSD PIDPEFMGVE VRERVEKGEQ VPVIATKINM VDLPLGATED RVCGTIDIEK
201: ALTEGVKAFE PGLLAKANRG ILYVDEVNLL DDHLVDVLLD SAASGWNTVE REGISISHPA RFILIGSGNP EEGELRPQLL DRFGMHAQVG TVRDADLRVK
301: IVEERARFDS NPKDFRDTYK TEQDKLQDQI STARANLSSV QIDRELKVKI SRVCSELNVD GLRGDIVTNR AAKALAALKG KDRVTPDDVA TVIPNCLRHR
401: LRKDPLESID SGVLVSEKFA EIFS

Arabidopsis Description

CHLI1Magnesium-chelatase subunit ChlI-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P16127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.