CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G27700.2	Thale cress	cytosol	61.7	56.04
PGSC0003DMT400071616	Potato	cytosol	62.39	38.8
Solyc03g058380.2.1	Tomato	nucleus	67.2	38.5
KRG88874	Soybean	cytosol	32.8	36.95
TraesCS7B01G382100.1	Wheat	cytosol	39.91	33.53
GSMUA_Achr5P09710_001	Banana	cytosol	64.45	31.33
CDY33673	Canola	cytosol	65.6	28.37
CDY45947	Canola	nucleus	74.31	28.25
PGSC0003DMT400033284	Potato	cytosol	8.94	27.27
CDX96600	Canola	cytosol	62.39	27.17
CDY20385	Canola	nucleus	73.85	26.46
Bra008279.1-P	Field mustard	nucleus	73.85	25.39
Solyc03g058350.2.1	Tomato	nucleus	67.2	25.35
AT1G76720.2	Thale cress	cytosol	69.5	24.75
Solyc06g054400.2.1	Tomato	nucleus	64.22	24.54
OQU79180	Sorghum	nucleus	47.94	24.33
AT1G76810.1	Thale cress	nucleus	70.41	23.72
Os05t0592600-01	Rice	nucleus	61.7	22.29
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	42.2	22.2
VIT_18s0076g00310.t01	Wine grape	nucleus	68.81	22.19
PGSC0003DMT400013995	Potato	nucleus	65.6	22.1
KRG91641	Soybean	nucleus	66.97	21.55
HORVU1Hr1G094740.1	Barley	nucleus	63.3	21.41
TraesCS1A01G438600.2	Wheat	nucleus	63.3	21.38
KXG22680	Sorghum	nucleus	63.3	21.35
TraesCS1D01G446400.1	Wheat	golgi	63.3	21.3
PGSC0003DMT400079119	Potato	nucleus	65.14	21.24
TraesCS1B01G472500.1	Wheat	nucleus	63.3	21.23
KRH35157	Soybean	nucleus	65.37	21.21
Zm00001d009749_P001	Maize	nucleus	62.84	21.19
TraesCS1D01G446900.2	Wheat	nucleus	63.3	19.66
PGSC0003DMT400030470	Potato	cytosol	2.29	15.62
PGSC0003DMT400029834	Potato	cytosol	2.29	15.62
GSMUA_Achr1P05220_001	Banana	nucleus	63.76	15.32
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	8.03	12.68
CDX94227	Canola	mitochondrion, plastid	14.91	11.67
CDY26262	Canola	cytosol	16.97	11.16
CDX81960	Canola	cytosol	7.11	11.11
CDY13882	Canola	cytosol	7.11	10.54
CDY05134	Canola	mitochondrion	17.66	10.5
CDX90791	Canola	mitochondrion	17.43	10.37
CDY25276	Canola	mitochondrion	17.43	10.33
CDY13881	Canola	cytosol	8.26	7.93
CDY48480	Canola	plastid	16.97	7.68
CDX83919	Canola	plastid	16.97	7.66
CDX96781	Canola	plastid	16.97	7.51
CDX81961	Canola	cytosol	5.05	7.46

Protein Annotations

MapMan:17.4.3.2	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	GO:A0A078IFR9	UniProt:A0A078IFR9
EnsemblPlants:CDY49760	ProteinID:CDY49760	ProteinID:CDY49760.1	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00093762001
InterPro:IPR000795	InterPro:IPR036925	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03144	PFAM:PF11987
PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF4	SUPFAM:SSF52156	SUPFAM:SSF52540
InterPro:TF_GTP-bd_dom	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	UniParc:UPI0004EE3909	SEG:seg

Description

BnaA02g29110DBnaA02g29110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFR9]

Coordinates

chrLK032857:+:38586..45938

Molecular Weight (calculated)

47649.2 Da

IEP (calculated)

6.240

GRAVY (calculated)

0.156

Length

436 amino acids

Sequence
(BLAST)

001: MLAGASDGFS SSSFSSSVLD GYGRVMVLVS LTVTACVRSS LTSQHYMGLF ELLVVVREAI VCRLGLGYGV QSEDTTKSKC SSSLLVRKLK VPGLLVIDTP
101: GHESFMNLWS RGSSLCDLAI LVVDITHGLE PQTIESLNLL RMRDTEFIVA LNKVDRLYGW KTCKNAPIVK AMKQQTKDVV NEFNMRLTGI ITQFKEQGLN
201: TELYYKNKEM GETFSIVPTS AITGEGIPDL LLLLVNWAQK TMVEKLTYVD DVQCTVLEVK VIEGHGTTID VVLVNGVLHE GDQIVVCGLQ ASINLGPIVT
301: TIRALLTPHP MKELRVKGTY VHHKEIKAAQ GIKITAQGLE HAIAGTALHV TEPDDDIEAM KEQAMEDMES VLSRIDKSGE GVYVQASTLG SLEALLEFLK
401: SPAVKILISG IGIGLVHKTD IFNVHPSTFK FTERSL

Best Arabidopsis Sequence Match ( AT1G76810.1 )
(BLAST)

0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.