Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96600 | Canola | cytosol | 82.94 | 83.52 |
| PGSC0003DMT400030470 | Potato | cytosol | 4.86 | 76.56 |
| PGSC0003DMT400029834 | Potato | cytosol | 4.76 | 75.0 |
| CDY49760 | Canola | plastid | 28.37 | 65.6 |
| PGSC0003DMT400071616 | Potato | cytosol | 45.04 | 64.76 |
| Solyc03g058380.2.1 | Tomato | nucleus | 47.12 | 62.42 |
| PGSC0003DMT400033284 | Potato | cytosol | 8.73 | 61.54 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 52.88 | 59.42 |
| AT1G21160.1 | Thale cress | cytosol | 56.85 | 52.47 |
| CDY45947 | Canola | nucleus | 59.62 | 52.4 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 25.6 | 49.71 |
| CDY20385 | Canola | nucleus | 59.62 | 49.38 |
| KRG88874 | Soybean | cytosol | 18.15 | 47.29 |
| Solyc06g054400.2.1 | Tomato | nucleus | 53.27 | 47.06 |
| Os05t0592600-01 | Rice | nucleus | 53.37 | 44.57 |
| Solyc03g058350.2.1 | Tomato | nucleus | 50.3 | 43.86 |
| KRG91641 | Soybean | nucleus | 57.24 | 42.58 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 53.87 | 42.06 |
| TraesCS1D01G446400.1 | Wheat | golgi | 53.97 | 41.98 |
| OQU79180 | Sorghum | nucleus | 35.71 | 41.91 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 53.87 | 41.77 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 11.41 | 41.67 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 53.27 | 41.66 |
| KXG22680 | Sorghum | nucleus | 53.37 | 41.61 |
| Zm00001d009749_P001 | Maize | nucleus | 53.27 | 41.53 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 55.65 | 41.49 |
| KRH35157 | Soybean | nucleus | 55.06 | 41.29 |
| PGSC0003DMT400013995 | Potato | nucleus | 51.29 | 39.95 |
| PGSC0003DMT400079119 | Potato | nucleus | 52.58 | 39.64 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 32.34 | 39.32 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 52.98 | 38.03 |
| CDX81961 | Canola | cytosol | 10.52 | 35.93 |
| CDX81960 | Canola | cytosol | 9.23 | 33.33 |
| CDY13882 | Canola | cytosol | 9.62 | 32.99 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 48.81 | 27.11 |
| CDY13881 | Canola | cytosol | 11.71 | 25.99 |
| CDY26262 | Canola | cytosol | 13.49 | 20.51 |
| CDY25276 | Canola | mitochondrion | 14.38 | 19.7 |
| CDY05134 | Canola | mitochondrion | 14.19 | 19.51 |
| CDX94227 | Canola | mitochondrion, plastid | 10.71 | 19.39 |
| CDX90791 | Canola | mitochondrion | 13.79 | 18.96 |
| CDX83919 | Canola | plastid | 15.97 | 16.67 |
| CDY48480 | Canola | plastid | 15.77 | 16.51 |
| CDX96781 | Canola | plastid | 15.58 | 15.92 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | GO:A0A078H9Z5 | UniProt:A0A078H9Z5 |
| EnsemblPlants:CDY33673 | ProteinID:CDY33673 | ProteinID:CDY33673.1 | ncoils:Coil | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| EnsemblPlantsGene:GSBRNA2T00055044001 | InterPro:IPR000795 | InterPro:IPR036925 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 |
| PFAM:PF11987 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF50447 |
| SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 |
| InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI0004EDEB1A | SEG:seg | : |
Description
BnaC08g19730DBnaC08g19730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Z5]
Coordinates
chrLK032319:-:397300..401390
Molecular Weight (calculated)
112425.0 Da
IEP (calculated)
7.310
GRAVY (calculated)
-0.586
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRKNTSACR GDEDHPFALS SKGGENPKNK SYNVRFDLLG IEDYEEETGD DVNVELSDEL MLGIQVNEET NTKSDDVGET SRSKKKKKNK SGKTPHKEED
0101: LDKILAELGI TPVSPAQPEL VPPAEDGSKD GEEETVVSVS AKKRKKKKDK DNKVSASSVE AKDGPSQPHK KVPKHILEMQ EMVARRKEAE EMKKKEEEEK
0201: LRKEEEERRI QEERERGAEE IKQKRKIREK EKMLKKKQEG GILTEKQKRD KAYKNKMLSD AGMLLASDKN TDSSKRPVYG NKRKPARAKE NDSASVLTKE
0301: KHADVVPSPE PDKKEEAGDE EDDWEAKSDD SVNIMGDYDD DGEDTPWLVI KKEIKDTASK AHYSGINTGP VTDRLALKAG VSCKPQKSKP KMDDATKRSN
0401: DDSVVNEVAK ESLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELR PDAKLKVPGL LVIDTPGHES FSNLRSRGSN
0501: LCDIAILVVD IMHGLEPQTI ESLNLLRKRN TEFIVALNKV DRLYGWKTCK NAPIEKALAL QSKDVVIEFN MRLTHVITQF KEQGLNTEIY YKNKEMGDTF
0601: SIVPTSAISG EGIPDLLLYL VMWSQKTMVE KLTFVDKVQC TVLEVKVIPG HGTTIDVILV NGVLHEGDQI VACGSQGPII TTVRSLLTPH PMKELRVKGT
0701: YLHHRKVKAA QCIKITAQGL EHAVAGTSLH VIGPDVDIEE AKKTAMEDMK SIMSWVDKSG EGVYVQASTL GSLEALLEFL KSPDVKIPVS GIGLGPVHKK
0801: DIMKAGVMLE KKKEYATVLA FDVKITTEAR ELADNMGVKI FCADIIYHLF DQFKGYVKGV RDEERKETAS EVVFPCVLKI LPNNVFKRGN PIILGVEVID
0901: GILKVGTPIC FLKEIGKSRV FLDLGRVASI HKDKKPLDDA KKGQQVAIKI IASNPGEEKT FGEDFGIEDE LVSHISRRSI DILKTLYRDE LKSEFKLVLK
1001: LKMLFKIQ
0101: LDKILAELGI TPVSPAQPEL VPPAEDGSKD GEEETVVSVS AKKRKKKKDK DNKVSASSVE AKDGPSQPHK KVPKHILEMQ EMVARRKEAE EMKKKEEEEK
0201: LRKEEEERRI QEERERGAEE IKQKRKIREK EKMLKKKQEG GILTEKQKRD KAYKNKMLSD AGMLLASDKN TDSSKRPVYG NKRKPARAKE NDSASVLTKE
0301: KHADVVPSPE PDKKEEAGDE EDDWEAKSDD SVNIMGDYDD DGEDTPWLVI KKEIKDTASK AHYSGINTGP VTDRLALKAG VSCKPQKSKP KMDDATKRSN
0401: DDSVVNEVAK ESLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELR PDAKLKVPGL LVIDTPGHES FSNLRSRGSN
0501: LCDIAILVVD IMHGLEPQTI ESLNLLRKRN TEFIVALNKV DRLYGWKTCK NAPIEKALAL QSKDVVIEFN MRLTHVITQF KEQGLNTEIY YKNKEMGDTF
0601: SIVPTSAISG EGIPDLLLYL VMWSQKTMVE KLTFVDKVQC TVLEVKVIPG HGTTIDVILV NGVLHEGDQI VACGSQGPII TTVRSLLTPH PMKELRVKGT
0701: YLHHRKVKAA QCIKITAQGL EHAVAGTSLH VIGPDVDIEE AKKTAMEDMK SIMSWVDKSG EGVYVQASTL GSLEALLEFL KSPDVKIPVS GIGLGPVHKK
0801: DIMKAGVMLE KKKEYATVLA FDVKITTEAR ELADNMGVKI FCADIIYHLF DQFKGYVKGV RDEERKETAS EVVFPCVLKI LPNNVFKRGN PIILGVEVID
0901: GILKVGTPIC FLKEIGKSRV FLDLGRVASI HKDKKPLDDA KKGQQVAIKI IASNPGEEKT FGEDFGIEDE LVSHISRRSI DILKTLYRDE LKSEFKLVLK
1001: LKMLFKIQ
0001: MDPRNSSAWG GGDGLPLISS MGGVESKNRC CVTDDDGSIG TKLCEKPKAE EIDFSARKKK LKSKKGGSVS FALLDVEDDK EEAEDGDDKN PSIRSDEVVG
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.