Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 3.99 | 84.38 |
| PGSC0003DMT400029834 | Potato | cytosol | 3.92 | 82.81 |
| Solyc03g058380.2.1 | Tomato | nucleus | 42.68 | 75.82 |
| PGSC0003DMT400071616 | Potato | cytosol | 38.31 | 73.89 |
| AT2G27700.2 | Thale cress | cytosol | 26.04 | 73.33 |
| CDY49760 | Canola | plastid | 22.19 | 68.81 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 45.64 | 68.78 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.17 | 67.83 |
| CDY45947 | Canola | nucleus | 51.92 | 61.2 |
| Solyc06g054400.2.1 | Tomato | nucleus | 50.44 | 59.77 |
| KRG91641 | Soybean | nucleus | 57.84 | 57.71 |
| CDY20385 | Canola | nucleus | 51.41 | 57.11 |
| Bra008279.1-P | Field mustard | nucleus | 53.25 | 56.78 |
| AT1G76810.1 | Thale cress | nucleus | 53.77 | 56.18 |
| CDY33673 | Canola | cytosol | 41.49 | 55.65 |
| Bra016430.1-P | Field mustard | cytosol | 42.6 | 55.65 |
| CDX96600 | Canola | cytosol | 40.75 | 55.05 |
| Solyc03g058350.2.1 | Tomato | nucleus | 46.97 | 54.93 |
| PGSC0003DMT400079119 | Potato | nucleus | 54.29 | 54.9 |
| Os05t0592600-01 | Rice | nucleus | 48.89 | 54.76 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 20.34 | 52.99 |
| AT1G76720.2 | Thale cress | cytosol | 47.63 | 52.61 |
| KRH35157 | Soybean | nucleus | 52.22 | 52.53 |
| AT1G21160.1 | Thale cress | cytosol | 42.09 | 52.11 |
| KXG22680 | Sorghum | nucleus | 49.63 | 51.89 |
| TraesCS1D01G446400.1 | Wheat | golgi | 49.63 | 51.77 |
| PGSC0003DMT400013995 | Potato | nucleus | 49.41 | 51.62 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 49.04 | 51.36 |
| Zm00001d009749_P001 | Maize | nucleus | 49.11 | 51.35 |
| KRG88874 | Soybean | cytosol | 14.57 | 50.9 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 48.52 | 50.89 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 48.67 | 50.62 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 9.76 | 47.83 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 48.45 | 46.65 |
| OQU79180 | Sorghum | nucleus | 28.4 | 44.7 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 26.26 | 42.82 |
| CDX81961 | Canola | cytosol | 8.14 | 37.29 |
| CDX81960 | Canola | cytosol | 7.32 | 35.48 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 45.64 | 33.99 |
| CDY13882 | Canola | cytosol | 7.25 | 33.33 |
| Bra031112.1-P | Field mustard | cytosol | 7.25 | 33.33 |
| Bra031113.1-P | Field mustard | cytosol | 9.32 | 27.75 |
| CDY13881 | Canola | cytosol | 9.32 | 27.75 |
| VIT_14s0060g02210.t01 | Wine grape | cytosol, plastid | 10.28 | 19.17 |
| VIT_19s0027g00130.t01 | Wine grape | plastid | 11.83 | 15.76 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ProteinID:CCB45136 | ProteinID:CCB45136.1 |
| ncoils:Coil | InterPro:EFTu-like_2 | UniProt:F6GYV0 | EMBL:FN594974 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 |
| InterPro:IPR036925 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 |
| PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 |
| InterPro:Transl_B-barrel_sf | UniParc:UPI000210A325 | ArrayExpress:VIT_18s0076g00310 | EnsemblPlantsGene:VIT_18s0076g00310 | EnsemblPlants:VIT_18s0076g00310.t01 | RefSeq:XP_002266920 |
| RefSeq:XP_002266920.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:16148931..16162057
Molecular Weight (calculated)
148163.0 Da
IEP (calculated)
4.935
GRAVY (calculated)
-0.735
Length
1352 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKPTTRD EEPAAATGNT KSKKKAQVID DDEYSIGTEF SEEPPALEEK VEPVAGKKKG KKGNLKSASQ LRDDDQEESE EDEDVAPVVF DGKKKGKPKK
0101: TGNSSGFSAL LVEDDNDQGS GLNEDRDEGS EGEDGSVVSF SGKKKSSKKS SKKSSSSLLS AGSFGAVDDG DDDEDESNKS ENDDPPVIAF TGKKKSSKGN
0201: KKGGVSSFDV LDEADGIDST ISEQQSVDEA DDAPVIFTGK KKSSKANKKG GGNVFAASSF EGLGEGDKDS DEKNEEDEDI ASIAFSGKKK SSNSSKKTSN
0301: IFSVASDDED KDEDVSVSEA AQVEDEEDAS KIAFSGKKKS SKKKNNNVLS ETGLGTDLAD VVESEQPSVG TVDNEELGEG SSSLKPTTPQ EEKVQVQPEP
0401: VQAADATVEK EGEEEGVESA AAKKKKKKKE KEKEKKAAAA AAAAGAVEVK EEKQVETKSK VPDKKLPKHV REMQEALARR KEAEERKKRE EEERLRKEEE
0501: ERRRQEELER LAEEAKRRKK EREKEKLLKK KQEGKLLTGK QKEEARRREA MRNQILANAG GLPISTGDAP TKRPKYQTKK VKSHPSQANG AAPSKPDENT
0601: EAKESLPETV SEVDSLEPEK LEEVDSVDVE EKLEITNATE ENGVEEEEDD EEWDAKSWDD AVVTLPDKSA FADEEADSET EPVVRKETKV AALPASRNVG
0701: VTTAAAKTSI VPKTAVPTQP IKTQDVRSEK SQIEIEVTNK SRKKAAPSSD ASPQGTEENL RSPICCIMGH VDTGKTKLLD CIRGTNVQEG EAGGITQQIG
0801: ATYFPAENIR ERTKELKADA NLKVPGLLVI DTPGHESFTN LRSRGSGLCD IAILVVDIMH GLEPQTIESL NLLKMRNTEF IVALNKVDRL YGWKVCRNSP
0901: IQKAMKQQSK DVQNEFNMRL TQIITQFKEQ GLNTELYYKN KEMGETFSIV PTSAISGEGI PDLLLLLVHW TQKTMVEKLT YSSEVQCTVL EVKVVEGHGT
1001: TIDVVLVNGV LHEGDQIVVC GMQGPIVATI RALLTPHPMK ELRVKGTYLH HKQIKAAQGI KITAQGLEHA IAGTGLYVVG PDDDLEDIKE AAMEDMKSVL
1101: SRIDKSGEGV YVQASTLGSL EALLEFLKSP AVSIPVSGIG IGPVHKKDVM KASVMLEKKK EYATILAFDV KVTPEARELA DDMGVKIFIA DIIYHLFDQF
1201: KAYIDNLKEE KKREAADEAV FPCVLKIMPN CIFNKKDPIV LGVDVLEGIA KVGTPICIPQ RDFIDIGRIA SIENNHKPVD IAKKGQRVAI KITSTNPEEQ
1301: QKMFGRHFEM EDELVSHISR KSIDTLKANY RDDLSLDEWK LVVKLKTLFK IQ
0101: TGNSSGFSAL LVEDDNDQGS GLNEDRDEGS EGEDGSVVSF SGKKKSSKKS SKKSSSSLLS AGSFGAVDDG DDDEDESNKS ENDDPPVIAF TGKKKSSKGN
0201: KKGGVSSFDV LDEADGIDST ISEQQSVDEA DDAPVIFTGK KKSSKANKKG GGNVFAASSF EGLGEGDKDS DEKNEEDEDI ASIAFSGKKK SSNSSKKTSN
0301: IFSVASDDED KDEDVSVSEA AQVEDEEDAS KIAFSGKKKS SKKKNNNVLS ETGLGTDLAD VVESEQPSVG TVDNEELGEG SSSLKPTTPQ EEKVQVQPEP
0401: VQAADATVEK EGEEEGVESA AAKKKKKKKE KEKEKKAAAA AAAAGAVEVK EEKQVETKSK VPDKKLPKHV REMQEALARR KEAEERKKRE EEERLRKEEE
0501: ERRRQEELER LAEEAKRRKK EREKEKLLKK KQEGKLLTGK QKEEARRREA MRNQILANAG GLPISTGDAP TKRPKYQTKK VKSHPSQANG AAPSKPDENT
0601: EAKESLPETV SEVDSLEPEK LEEVDSVDVE EKLEITNATE ENGVEEEEDD EEWDAKSWDD AVVTLPDKSA FADEEADSET EPVVRKETKV AALPASRNVG
0701: VTTAAAKTSI VPKTAVPTQP IKTQDVRSEK SQIEIEVTNK SRKKAAPSSD ASPQGTEENL RSPICCIMGH VDTGKTKLLD CIRGTNVQEG EAGGITQQIG
0801: ATYFPAENIR ERTKELKADA NLKVPGLLVI DTPGHESFTN LRSRGSGLCD IAILVVDIMH GLEPQTIESL NLLKMRNTEF IVALNKVDRL YGWKVCRNSP
0901: IQKAMKQQSK DVQNEFNMRL TQIITQFKEQ GLNTELYYKN KEMGETFSIV PTSAISGEGI PDLLLLLVHW TQKTMVEKLT YSSEVQCTVL EVKVVEGHGT
1001: TIDVVLVNGV LHEGDQIVVC GMQGPIVATI RALLTPHPMK ELRVKGTYLH HKQIKAAQGI KITAQGLEHA IAGTGLYVVG PDDDLEDIKE AAMEDMKSVL
1101: SRIDKSGEGV YVQASTLGSL EALLEFLKSP AVSIPVSGIG IGPVHKKDVM KASVMLEKKK EYATILAFDV KVTPEARELA DDMGVKIFIA DIIYHLFDQF
1201: KAYIDNLKEE KKREAADEAV FPCVLKIMPN CIFNKKDPIV LGVDVLEGIA KVGTPICIPQ RDFIDIGRIA SIENNHKPVD IAKKGQRVAI KITSTNPEEQ
1301: QKMFGRHFEM EDELVSHISR KSIDTLKANY RDDLSLDEWK LVVKLKTLFK IQ
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.