CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031112.1-P	Field mustard	cytosol	100.0	100.0
CDX81960	Canola	cytosol	84.35	88.89
PGSC0003DMT400029834	Potato	cytosol	8.16	37.5
PGSC0003DMT400030470	Potato	cytosol	8.16	37.5
CDX81961	Canola	cytosol	32.65	32.54
PGSC0003DMT400033284	Potato	cytosol	13.61	27.97
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	22.11	23.55
CDY13881	Canola	cytosol	33.67	21.81
TraesCS7B01G382100.1	Wheat	cytosol	26.53	15.03
PGSC0003DMT400071616	Potato	cytosol	32.31	13.55
Solyc03g058380.2.1	Tomato	nucleus	32.99	12.75
GSMUA_Achr5P09710_001	Banana	cytosol	32.65	10.7
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	28.23	10.01
CDY33673	Canola	cytosol	32.99	9.62
CDX96600	Canola	cytosol	30.95	9.09
OQU79180	Sorghum	nucleus	26.53	9.08
CDY45947	Canola	nucleus	35.37	9.07
Solyc06g054400.2.1	Tomato	nucleus	34.69	8.94
CDY20385	Canola	nucleus	35.37	8.55
Solyc03g058350.2.1	Tomato	nucleus	33.33	8.48
Os05t0592600-01	Rice	nucleus	32.65	7.95
Zm00001d009749_P001	Maize	nucleus	33.67	7.66
KXG22680	Sorghum	nucleus	33.67	7.66
PGSC0003DMT400079119	Potato	nucleus	34.35	7.55
HORVU1Hr1G094740.1	Barley	nucleus	32.65	7.45
TraesCS1A01G438600.2	Wheat	nucleus	32.65	7.44
TraesCS1D01G446400.1	Wheat	golgi	32.65	7.41
TraesCS1B01G472500.1	Wheat	nucleus	32.65	7.38
VIT_18s0076g00310.t01	Wine grape	nucleus	33.33	7.25
KRH35157	Soybean	nucleus	32.99	7.22
KRG91641	Soybean	nucleus	32.99	7.16
CDY49760	Canola	plastid	10.54	7.11
CDY25276	Canola	mitochondrion	17.69	7.07
TraesCS1D01G446900.2	Wheat	nucleus	32.31	6.77
CDY05134	Canola	mitochondrion	16.67	6.68
CDX90791	Canola	mitochondrion	15.65	6.28
KRG88874	Soybean	cytosol	7.82	5.94
CDY26262	Canola	cytosol	12.24	5.43
PGSC0003DMT400013995	Potato	nucleus	23.13	5.26
GSMUA_Achr1P05220_001	Banana	nucleus	31.97	5.18
CDY48480	Canola	plastid	12.24	3.74
CDX83919	Canola	plastid	12.24	3.73
CDX96781	Canola	plastid	12.24	3.65
CDX94227	Canola	mitochondrion, plastid	6.12	3.23

Protein Annotations

EnsemblPlants:CDY13882	EnsemblPlantsGene:GSBRNA2T00078333001	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	InterPro:IPR036925	InterPro:TIF_IF2
InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	InterPro:Transl_B-barrel_sf	PANTHER:PTHR43381	PANTHER:PTHR43381:SF4	PFAM:PF11987
ProteinID:CDY13882	ProteinID:CDY13882.1	SEG:seg	SUPFAM:SSF50447	SUPFAM:SSF52156	UniParc:UPI0002542967
UniProt:A0A078FLL9	MapMan:35.2	:	:	:	:

Description

BnaA09g43840DBnaA09g43840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLL9]

Coordinates

chrLK032038:-:768964..770114

Molecular Weight (calculated)

32359.5 Da

IEP (calculated)

7.390

GRAVY (calculated)

-0.032

Length

294 amino acids

Sequence
(BLAST)

001: MEQSESAYRI RGATASYLRG KGVVLEEDIR SREYGFYTAM NDVMGCLKKK KEGKEEGVYA IASSFGYLFE LVLHLTSAEV NIPVTGLGVG PVTPGDIRKA
101: TQLLQTKKHT VLAFRVNVTP KASHLAQTLG VKIICGDTIE HLCQQFQECN KELGDDKSES DVAAVSPCLL SILPKCVLNK EDPIIVGVYV VEGFVKVGTP
201: LCIPHRAFVN IGRVAWIQKD QRPVEFAREG EKVIIKIVAA DPKTQQGMLL GIDLDEGDVL VSRTSAVAVY QVEINRQMEK IIELTNKQKN VLIT

Best Arabidopsis Sequence Match ( AT1G76810.1 )
(BLAST)

0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.