CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G27700.2	Thale cress	cytosol	41.6	33.54
CDY49760	Canola	plastid	36.95	32.8
PGSC0003DMT400071616	Potato	cytosol	48.06	26.53
Solyc03g058380.2.1	Tomato	nucleus	50.65	25.76
TraesCS7B01G382100.1	Wheat	cytosol	29.46	21.97
GSMUA_Achr5P09710_001	Banana	cytosol	47.8	20.62
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	39.28	18.34
CDX96600	Canola	cytosol	47.29	18.28
CDY33673	Canola	cytosol	47.29	18.15
OQU79180	Sorghum	nucleus	39.28	17.7
Bra016430.1-P	Field mustard	cytosol	47.29	17.68
Solyc03g058350.2.1	Tomato	nucleus	50.13	16.78
CDY45947	Canola	nucleus	48.58	16.39
Solyc06g054400.2.1	Tomato	nucleus	47.8	16.21
AT1G21160.1	Thale cress	cytosol	45.22	16.03
PGSC0003DMT400029834	Potato	cytosol	2.58	15.62
PGSC0003DMT400030470	Potato	cytosol	2.58	15.62
AT1G76720.2	Thale cress	cytosol	48.84	15.44
CDY20385	Canola	nucleus	48.32	15.37
Os05t0592600-01	Rice	nucleus	47.8	15.33
KRH35157	Soybean	nucleus	52.2	15.03
KRH48578	Soybean	cytosol, extracellular	4.39	14.91
KRG91641	Soybean	nucleus	52.2	14.91
AT1G76810.1	Thale cress	nucleus	49.61	14.84
Bra008279.1-P	Field mustard	nucleus	47.8	14.59
HORVU1Hr1G094740.1	Barley	nucleus	48.58	14.58
VIT_18s0076g00310.t01	Wine grape	nucleus	50.9	14.57
TraesCS1A01G438600.2	Wheat	nucleus	48.58	14.56
Zm00001d009749_P001	Maize	nucleus	48.58	14.54
TraesCS1D01G446400.1	Wheat	golgi	48.58	14.51
KXG22680	Sorghum	nucleus	48.32	14.46
TraesCS1B01G472500.1	Wheat	nucleus	48.58	14.46
PGSC0003DMT400079119	Potato	nucleus	48.32	13.99
PGSC0003DMT400013995	Potato	nucleus	45.99	13.76
TraesCS1D01G446900.2	Wheat	nucleus	48.58	13.39
PGSC0003DMT400033284	Potato	cytosol	4.91	13.29
KRH68380	Soybean	mitochondrion	19.12	10.31
KRG96646	Soybean	mitochondrion	19.12	10.31
GSMUA_Achr1P05220_001	Banana	nucleus	41.86	8.93
CDX81960	Canola	cytosol	6.2	8.6
KRH13635	Soybean	nucleus	20.93	7.98
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	5.68	7.97
KRH43837	Soybean	nucleus, plastid	20.67	7.92
CDY13882	Canola	cytosol	5.94	7.82
Bra031112.1-P	Field mustard	cytosol	5.94	7.82
Bra031113.1-P	Field mustard	cytosol	8.79	7.49
CDX81961	Canola	cytosol	5.68	7.46
CDY13881	Canola	cytosol	8.01	6.83

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.300	MapMan:35.2	EnsemblPlantsGene:GLYMA_U010100	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795
UniProt:K7LQ29	EnsemblPlants:KRG88874	ProteinID:KRG88874	ProteinID:KRG88874.1	InterPro:P-loop_NTPase	PFAM:PF00009
PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF4	SUPFAM:SSF50447	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom
InterPro:TIF_IF2	InterPro:Transl_B-barrel_sf	UniParc:UPI0002948237	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_21:-:195115..200120

Molecular Weight (calculated)

43264.3 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.032

Length

387 amino acids

Sequence
(BLAST)

001: MDTDTGRKKP RENENLGSPM LCIMGHVDTG KTKLLDCIRG TNVQERELIN AKLNPPGLLV LDTPGHESFT YFRFMASLLC DFAILVVDTL HGLEQQTLES
101: LYLLRGMNKK FIVVLNNVDK LRGWKPCHNT PITEAVEQQT QDVQLKFNGL LDDITYLFEQ VGPSTQYLNT DIVPTSAISG EGIPELLSLL VQWTQKTMAQ
201: KLTCSEKLQC TVLDVEVVED HGTTIDFVLV NGVLHEVEQI VVCGMPGPIV TTIQALLAPH PIKELCVKIG TPICIPSREF IDIGRVASIE NNHLPVDYAR
301: KGQKVAIKEA KRLYLLHNVE KEKRSLIKIS VPPCQKAPHS PRYAKIPGRV IVGMHLLLSY AKRCIFTCCT KACSQKRSLI TILNYLK

Best Arabidopsis Sequence Match ( AT1G76810.1 )
(BLAST)

0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.