Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G27700.2 | Thale cress | cytosol | 27.37 | 69.79 |
| CDY49760 | Canola | plastid | 24.75 | 69.5 |
| Solyc03g058380.2.1 | Tomato | nucleus | 40.52 | 65.18 |
| PGSC0003DMT400071616 | Potato | cytosol | 36.76 | 64.19 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 46.0 | 62.76 |
| CDY45947 | Canola | nucleus | 56.7 | 60.51 |
| CDY20385 | Canola | nucleus | 56.94 | 57.27 |
| AT1G76810.1 | Thale cress | nucleus | 59.56 | 56.34 |
| Bra008279.1-P | Field mustard | nucleus | 57.92 | 55.91 |
| PGSC0003DMT400030470 | Potato | cytosol | 2.86 | 54.69 |
| PGSC0003DMT400033284 | Potato | cytosol | 6.21 | 53.15 |
| PGSC0003DMT400029834 | Potato | cytosol | 2.78 | 53.12 |
| AT1G21160.1 | Thale cress | cytosol | 46.9 | 52.56 |
| Solyc06g054400.2.1 | Tomato | nucleus | 47.3 | 50.74 |
| KRG88874 | Soybean | cytosol | 15.44 | 48.84 |
| Os05t0592600-01 | Rice | nucleus | 47.96 | 48.63 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 20.59 | 48.55 |
| KRG91641 | Soybean | nucleus | 53.51 | 48.34 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 52.61 | 47.63 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 49.18 | 46.7 |
| Solyc03g058350.2.1 | Tomato | nucleus | 43.79 | 46.37 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 48.69 | 46.17 |
| TraesCS1D01G446400.1 | Wheat | golgi | 48.77 | 46.06 |
| Zm00001d009749_P001 | Maize | nucleus | 48.61 | 46.02 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 48.61 | 45.77 |
| KXG22680 | Sorghum | nucleus | 48.28 | 45.71 |
| KRH35157 | Soybean | nucleus | 50.0 | 45.54 |
| PGSC0003DMT400013995 | Potato | nucleus | 47.47 | 44.9 |
| PGSC0003DMT400079119 | Potato | nucleus | 48.69 | 44.58 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 48.61 | 42.38 |
| OQU79180 | Sorghum | nucleus | 29.0 | 41.33 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 26.23 | 38.72 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 8.5 | 37.68 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 44.2 | 29.81 |
| AT4G11160.2 | Thale cress | plastid | 10.62 | 17.5 |
| AT1G17220.1 | Thale cress | plastid | 12.17 | 14.52 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | EntrezGene:844006 | ProteinID:AAF04435.1 |
| ProteinID:ANM60268.1 | ArrayExpress:AT1G76720 | EnsemblPlantsGene:AT1G76720 | RefSeq:AT1G76720 | TAIR:AT1G76720 | RefSeq:AT1G76720-TAIR-G |
| EnsemblPlants:AT1G76720.2 | Unigene:At.70343 | ncoils:Coil | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 |
| RefSeq:NP_001322567.1 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 |
| PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | UniProt:Q9SRE1 | SUPFAM:SSF50447 | SUPFAM:SSF52156 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf |
| TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI00000A81ED | SEG:seg | : | : |
Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRE1]
Coordinates
chr1:-:28794144..28798876
Molecular Weight (calculated)
135059.0 Da
IEP (calculated)
5.328
GRAVY (calculated)
-0.754
Length
1224 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVICWKISEP MGRKKPSSSR GGDDEQPPAA SSLVGAESKK KAVQSDEEDK YSINTEEEKV VITGKKKSNK KVTQKHDDDD DFTEAVPENG FVGKKKKSKG
0101: KNRGGSVSFA LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSG KKTRSSKSSK KTTNKVALPD
0201: EEEGTMGDEE SLEITFSGKK KGSIVLASLG DDSVADETSQ AKTPDTKSVE VIETGKIKKK KKNKNKVART LEEEDDLDKL LAELGETPAA ERPASSTPEV
0301: EKVQAQPGPV APVENAGEKE GEKETVETAA AKKKKKKKEK DKEKKAAAAA TSSVEAKEEK QEESVTEPLQ PKKKDAKGKA AEKKIPKHVR EMQEALARRQ
0401: EAEERKKKEE EEKLRKEEEE RRRQEELEAQ AEEAKRKRKE KEKEKLLRKK LEGKLLTAKQ KTEAQKREAF KNQLLAAGRG LPVADDVGDA TSSKRPIYAN
0501: KKKPSRQKGN DTSVQVEDEV EPQENHAATL GEVGSEDTEK VDLLESANTG EKSGPADVAQ ENGVEEDDEW DAKSWDNVDL KIDDKEEEAQ PVVKKELKAH
0601: DSDHETEKPT AKPAGMSKLT TGAVKAISEV EDAATQTKRA KKGKCLAPSE FIKEGGENLR SIICCIMGHV DSGKTKLLDC IRGTNVQEGE AGGITQQIGA
0701: TYFPAKNIRE RTRELKADAK LKVPGLLVID TPGHESFTNL RSRGSSLCDL AILVVDIKHG LEPQTIESLN LLRMRNTEFI IALNKVDRLY GWKTCKNAPI
0801: VKAMKQQNKD VTNEFNIRLT DIITQFKEQG LNTEIYYKNK EMGETFSIVP TSAKSGEGVP DLLLWLVQWA QKTMVEKLTY VDEVQCTVLE VKVIEGHGTT
0901: IDVVLVNGEL HEGDQIVVCG LQGPIVTTIR ALLTPHPMKE LRVKGTYLHH KEIKAAQGIK ITAQGLEHAI AGTSLHVVGP DDDIEAMKES AMEDMESVLS
1001: RIDKSGEGVY VQTSTLGSLE ALLEFLKTPA VNIPVSEGYN EGWSDAREEK EYATILAFDV KVTTEARELA DEMGVKIFCA DIIYQLFNQF QVYIENIKEE
1101: KKKESAGEAV FPCVLQILPN CVFNKRDPII LGVKVHDGIL KIGTPICVPG REFTDIGRIA SIENNHKPVD YAEKGDEVAI KIVASNREEQ KMFGRHFDME
1201: DELVSHISRR SIDILKADYM VSQG
0101: KNRGGSVSFA LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSG KKTRSSKSSK KTTNKVALPD
0201: EEEGTMGDEE SLEITFSGKK KGSIVLASLG DDSVADETSQ AKTPDTKSVE VIETGKIKKK KKNKNKVART LEEEDDLDKL LAELGETPAA ERPASSTPEV
0301: EKVQAQPGPV APVENAGEKE GEKETVETAA AKKKKKKKEK DKEKKAAAAA TSSVEAKEEK QEESVTEPLQ PKKKDAKGKA AEKKIPKHVR EMQEALARRQ
0401: EAEERKKKEE EEKLRKEEEE RRRQEELEAQ AEEAKRKRKE KEKEKLLRKK LEGKLLTAKQ KTEAQKREAF KNQLLAAGRG LPVADDVGDA TSSKRPIYAN
0501: KKKPSRQKGN DTSVQVEDEV EPQENHAATL GEVGSEDTEK VDLLESANTG EKSGPADVAQ ENGVEEDDEW DAKSWDNVDL KIDDKEEEAQ PVVKKELKAH
0601: DSDHETEKPT AKPAGMSKLT TGAVKAISEV EDAATQTKRA KKGKCLAPSE FIKEGGENLR SIICCIMGHV DSGKTKLLDC IRGTNVQEGE AGGITQQIGA
0701: TYFPAKNIRE RTRELKADAK LKVPGLLVID TPGHESFTNL RSRGSSLCDL AILVVDIKHG LEPQTIESLN LLRMRNTEFI IALNKVDRLY GWKTCKNAPI
0801: VKAMKQQNKD VTNEFNIRLT DIITQFKEQG LNTEIYYKNK EMGETFSIVP TSAKSGEGVP DLLLWLVQWA QKTMVEKLTY VDEVQCTVLE VKVIEGHGTT
0901: IDVVLVNGEL HEGDQIVVCG LQGPIVTTIR ALLTPHPMKE LRVKGTYLHH KEIKAAQGIK ITAQGLEHAI AGTSLHVVGP DDDIEAMKES AMEDMESVLS
1001: RIDKSGEGVY VQTSTLGSLE ALLEFLKTPA VNIPVSEGYN EGWSDAREEK EYATILAFDV KVTTEARELA DEMGVKIFCA DIIYQLFNQF QVYIENIKEE
1101: KKKESAGEAV FPCVLQILPN CVFNKRDPII LGVKVHDGIL KIGTPICVPG REFTDIGRIA SIENNHKPVD YAEKGDEVAI KIVASNREEQ KMFGRHFDME
1201: DELVSHISRR SIDILKADYM VSQG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.