Factsheet for AT4G11160.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25276	Canola	mitochondrion	83.98	84.78
Bra033153.1-P	Field mustard	cytosol	78.47	84.25
CDY05134	Canola	mitochondrion	78.2	79.26
CDX94227	Canola	mitochondrion, plastid	58.82	78.46
CDX90791	Canola	mitochondrion	72.68	73.67
KRH48578	Soybean	cytosol, extracellular	10.77	70.18
GSMUA_Achr11P...	Banana	cytosol	53.16	67.52
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	62.99	64.55
PGSC0003DMT400031711	Potato	mitochondrion	63.66	64.27
Solyc08g081900.2.1	Tomato	mitochondrion	62.99	63.59
KRH68380	Soybean	mitochondrion	60.7	62.81
KRG96646	Soybean	mitochondrion	59.49	61.56
Os09t0515500-01	Rice	mitochondrion	58.01	60.2
HORVU1Hr1G077340.1	Barley	mitochondrion	56.93	59.41
TraesCS1A01G331200.1	Wheat	mitochondrion	56.53	58.99
TraesCS1B01G345100.2	Wheat	mitochondrion	56.53	58.99
TraesCS1D01G333900.1	Wheat	mitochondrion	56.12	58.57
KXG26389	Sorghum	mitochondrion	56.12	58.57
Zm00001d003556_P003	Maize	mitochondrion	56.53	57.14
Bra000738.1-P	Field mustard	cytosol	72.95	52.88
AT1G17220.1	Thale cress	plastid	30.96	22.42
AT2G27700.2	Thale cress	cytosol	11.71	18.12
AT1G21160.1	Thale cress	cytosol	19.25	13.1
AT1G76720.2	Thale cress	cytosol	17.5	10.62
AT1G76810.1	Thale cress	nucleus	18.3	10.51

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	EntrezGene:826717	EMBL:AK175792
EMBL:AK176005	EMBL:AK176053	EMBL:AK176150	EMBL:AK220747	EMBL:AK221093	ProteinID:ANM68113.1
ArrayExpress:AT4G11160	EnsemblPlantsGene:AT4G11160	RefSeq:AT4G11160	TAIR:AT4G11160	RefSeq:AT4G11160-TAIR-G	EnsemblPlants:AT4G11160.2
Unigene:At.3295	EMBL:BT015371	EMBL:BT015894	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925	HAMAP:MF_00100_B	RefSeq:NP_192854.2	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	UniProt:Q67ZW2
SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like
InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf
UniParc:UPI000034F1E2	SEG:seg	:	:	:	:

Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]

Coordinates

chr4:+:6803436..6806927

Molecular Weight (calculated)

80233.7 Da

IEP (calculated)

7.176

GRAVY (calculated)

-0.113

Length

743 amino acids

Sequence
(BLAST)

001: MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS
101: HRERKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET FSSEFDTISV DVAELLAMEI
201: GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA
301: ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV
401: EARLDKGRGP LATIIVKAGT LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA RMLSEGRKRK YEKDRLLKAE
501: EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV
601: FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG
701: NECGLVFGDW NDFRVGDVIQ CMEPVIRKPK FISSESGAVR IEC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.