Factsheet for GSMUA_Achr11P01750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48578	Soybean	cytosol, extracellular	14.19	72.81
KXG26389	Sorghum	mitochondrion	78.63	64.61
Os09t0515500-01	Rice	mitochondrion	78.12	63.83
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	77.78	62.76
Zm00001d003556_P003	Maize	mitochondrion	78.12	62.18
TraesCS1D01G333900.1	Wheat	mitochondrion	75.56	62.08
TraesCS1A01G331200.1	Wheat	mitochondrion	75.38	61.94
TraesCS1B01G345100.2	Wheat	mitochondrion	75.21	61.8
HORVU1Hr1G077340.1	Barley	mitochondrion	74.7	61.38
PGSC0003DMT400031711	Potato	mitochondrion	76.07	60.46
Solyc08g081900.2.1	Tomato	mitochondrion	75.9	60.33
KRG96646	Soybean	mitochondrion	73.68	60.03
KRH68380	Soybean	mitochondrion	73.16	59.61
Bra033153.1-P	Field mustard	cytosol	68.55	57.95
AT4G11160.2	Thale cress	plastid	67.52	53.16
CDY25276	Canola	mitochondrion	66.84	53.12
CDY05134	Canola	mitochondrion	65.47	52.25
CDX94227	Canola	mitochondrion, plastid	49.06	51.53
CDX90791	Canola	mitochondrion	63.93	51.02
Bra000738.1-P	Field mustard	cytosol	63.93	36.49
GSMUA_Achr8P07210_001	Banana	plastid	36.41	21.98
GSMUA_Achr3P23270_001	Banana	plastid	36.24	21.81
GSMUA_Achr5P09710_001	Banana	cytosol	20.17	13.15
GSMUA_Achr1P05220_001	Banana	nucleus	17.44	5.62

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G01750_001	EnsemblPlants:GSMUA_Achr11P01750_001	EnsemblPlants:GSMUA_Achr11T01750_001	InterPro:IPR000795	InterPro:IPR036925
UniProt:M0RNK5	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PFscan:PS51722
PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf	UniParc:UPI00029651F1	SEG:seg	:	:

Description

Putative Translation initiation factor IF-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G01750_001]

Coordinates

chr11:-:1181477..1188076

Molecular Weight (calculated)

62150.3 Da

IEP (calculated)

5.690

GRAVY (calculated)

0.034

Length

585 amino acids

Sequence
(BLAST)

001: MTILELAKRT GASIGSLQEI MKNVGEKVDS EFDPISVDVA ELVAMEVGVN ARRLHSDEGA VLQPRAPVVT VMGHVDHGKT SLLDALRQTS VAAKEAGGIT
101: QHLGAFVVDM PSGASITFLD TPGHAAFSAM RARGAAVTDI VVLVVAADDG VMPQTLEAIS HAKAANVPIV VAINKCDKPS ADPQRVRIQL GSEGLPLEDL
201: GGDVQVVEVS ATSKIGLDKL EEALLLQAEM MDLKARIDGP AQAYVVEARV DRGKGPLATA IVKSGTLLCG QHIVVGAAWG RIRTIRDMVG RATESGQPAM
301: PVEIEGLKGV PMAGDDVTVV GSEERARMLS AGRKKKLEKD RLHKASEMTT DIPDASEEVP KRVELPIIIK ADVQGTVQAV TDAVRSMNNA QVFVNVIHVG
401: VGPISESDID LAEACGACIV GFNIRNPPTA ITHAANQANI KICLHRVIYH LLEEIGKYII DKAPGTFETK VAGEAEVLSI FELKGRSKSK GPDIKIAGCR
501: VVDGRFIKSS TMRLLRSGEI VFEGSCASLK REQQDVEAVS KGNECGLVIQ DCDDFQVGDI IQCLEQVNKK PKFVSTVGGA VRIEC

Best Arabidopsis Sequence Match ( AT4G11160.2 )
(BLAST)

001: MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS
101: HRERKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET FSSEFDTISV DVAELLAMEI
201: GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA
301: ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV
401: EARLDKGRGP LATIIVKAGT LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA RMLSEGRKRK YEKDRLLKAE
501: EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV
601: FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG
701: NECGLVFGDW NDFRVGDVIQ CMEPVIRKPK FISSESGAVR IEC

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.