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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90791 Canola mitochondrion 63.9 89.36
Bra033153.1-P Field mustard cytosol 53.46 79.19
AT4G11160.2 Thale cress plastid 52.88 72.95
KRH48578 Soybean cytosol, extracellular 7.71 69.3
GSMUA_Achr11P... Banana cytosol 36.49 63.93
VIT_14s0060g02210.t01 Wine grape cytosol, plastid 41.76 59.03
PGSC0003DMT400031711 Potato mitochondrion 41.85 58.29
Solyc08g081900.2.1 Tomato mitochondrion 41.56 57.88
KRH68380 Soybean mitochondrion 40.49 57.8
KRG96646 Soybean mitochondrion 39.8 56.82
Os09t0515500-01 Rice mitochondrion 39.22 56.15
HORVU1Hr1G077340.1 Barley mitochondrion 38.83 55.9
TraesCS1A01G331200.1 Wheat mitochondrion 38.73 55.76
KXG26389 Sorghum mitochondrion 38.63 55.62
TraesCS1B01G345100.2 Wheat mitochondrion 38.44 55.34
TraesCS1D01G333900.1 Wheat mitochondrion 38.24 55.06
Zm00001d003556_P003 Maize mitochondrion 38.83 54.15
Bra016612.1-P Field mustard plastid 22.93 23.02
Bra025989.1-P Field mustard plastid 22.83 22.83
Bra031112.1-P Field mustard cytosol 4.98 17.35
Bra031113.1-P Field mustard cytosol 6.44 14.54
Bra016430.1-P Field mustard cytosol 14.63 14.49
Bra008279.1-P Field mustard nucleus 14.54 11.75
Protein Annotations
MapMan:17.7.3.3Gene3D:2.40.30.10Gene3D:3.40.50.10050Gene3D:3.40.50.300EnsemblPlantsGene:Bra000738EnsemblPlants:Bra000738.1
EnsemblPlants:Bra000738.1-Pncoils:CoilInterPro:DirigentGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003743GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006412GO:GO:0006413GO:GO:0008135
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016787GO:GO:0016853
GO:GO:0019538InterPro:IPR000795InterPro:IPR036925UniProt:M4C960HAMAP:MF_00100_BInterPro:P-loop_NTPase
PFAM:PF00009PFAM:PF03018PFAM:PF11987PFscan:PS51722PANTHER:PTHR43381PANTHER:PTHR43381:SF1
SUPFAM:SSF50447SUPFAM:SSF52156SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:TF_GTP-bd_domInterPro:TF_IF2_bacterial-like
InterPro:TIF_IF2InterPro:TIF_IF2_dom3InterPro:TIF_IF2_dom3_sfTIGRFAMs:TIGR00231TIGRFAMs:TIGR00487InterPro:Transl_B-barrel_sf
UniParc:UPI000253FC7DSEG:seg::::
Description
AT4G11160 (E=0.0) | translation initiation factor IF-2, mitochondrial, putative
Coordinates
chrA03:+:12771026..12785454
Molecular Weight (calculated)
113417.0 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.280
Length
1025 amino acids
Sequence
(BLAST)
0001: MTIIATLMNL RKVNGNWRKW EQGCVVDNVF YYYDVYKNKL RAYDPKDQSR GQREDLVCGD CFGNLNRKEI SGKVQWCDVG DGNESFTRVV KKKKTSPSLK
0101: ATTKPTSAIC LVSEAQQGIP KLCPCGSITK EFVDEDDTYD YLPGKRYFIC TDYQNDGLHF RQPWVMGVQQ EIERLKLKFL EQEKLLRECE ALKGIQASFK
0201: RGLVLLRVAA STESQISSTF LNSNSESVAF SFARYINGFG FSSLSNGESS PNLRSIRYFH ASRETLARRK DDPDRPLSHR ERKKQAVKTK AKFSKRDKKT
0301: DKPPAEAPYV PPPRLEKPEK RMAEKTVEVF DGMTLLEFSK RTGESLAVLQ SILVDVGETV SSEFDAISID VAELLAMEIG NKVKREHTTE GTQILPRPPV
0401: VTVMGHVDHG KTSLLDALRN TSVAAKEAGG ITQHVGAFVV GMPESGTSIT FLDTPGHAAF SEMRARGAAV TDIVVLVVAA DDGMMPQTLE AIAHARSANV
0501: PIVVAINKCD KPGANPERVK KQLAAEGIEI EDIGGNVQVV EVSAVKSTGL DKLEEALLLQ AVDMDLMARV DGPAQAYVVE ARLDKGRGPL ATVIVKAGTL
0601: ESGQHVVIGC QWGKLRAIRD MVGKPTERAT PAMPVEIEGL KGVPMAGDDV IVVESEKRAK MLSEGRTRKY ERDRLLKAEE DRIAELEKRE AESEEGFGRV
0701: ELPIIVKSDV QGTAQAVSDA LRTLNSPQVF VNIVQSGVGA IFQSDLARAQ TCNACIVAFN VKCCKISSAY ARVKVFHHRV IYHLLQDIGN LIVEKAPGVS
0801: ELEVAGEAEV LSIFKVLGKR REEDGVSIAG CKVMDGRVFR SGLMRLLRSG EVLFEGSCAS LKREKQDVEQ VGKGNECGLV MGDWNDFRVG DVIQCMERVI
0901: RKPKFVSSES GARTTSPNQW LAHKASSSTT RRRLTTYAQG FFFYNKKTTY NIWMACTLVF NSTQHKGTMT IMDANPMMEP TRDLAIVGGT GDFIMARGIV
1001: TLTTDLIQES KYFRLKLDIK LYECY
Best Arabidopsis Sequence Match ( AT4G11160.1 )
(BLAST)
001: MTSRHLGKKG IQASFRIGLV LPRVVASTER QISSTVLKRA SESVSFSFAP YINGFGFSSL SNWSRSYESF PTETSIRYFH ASRETLAKRK EDADRLLSHR
101: ERKKQTVKTK GKFSKREKKT DKPPVEAPYV PPRLKRLAKG LPGKTVDIFE GMTLLELSKR TGESVAVLQS ILINVGETFS SEFDTISVDV AELLAMEIGI
201: NVRRQHSTEG SEILPRPPVV TVMGHVDHGK TSLLDALRNT SVAAREAGGI TQHVGAFVVG MPDSGTSITF LDTPGHAAFS EMRARGAAVT DIVVLVVAAD
301: DGVMPQTLEA IAHARSANVP VVVAINKCDK PGANPEKVKY QLTSEGIELE DIGGNVQAVE VSAAKSTGLD KLEEALLLQA VDMDLKARVD GPAQAYVVEA
401: RLDKGRGPLA TIIVKAGTLV RGQHVVIGCQ WGRLRAIRDM IGKTTDRATP AMPVEIEGLK GLPMAGDDVI VVESEERARM LSEGRKRKYE KDRLLKAEEA
501: RLEEAAARLE TESEEGFVRV ELPIVVKSDV QGTAQAVADA LRTLNSPQVS VNIVHSGVGA ISHSDLDLAQ ACGACIVGFN VKGGSTGNLS AAQGSVKVFH
601: HRVIYHLLED IGNLIVEKAP GVSEMEVSGE AEVLSIFKIL GKRRTEEDGV NIAGCKVMDG RVCRSGLMRL LRSGEVVFEG SCASLKREKQ DVEQVGKGNE
701: CGLVFGDWND FRVGDVIQCM EPVIRKPKFI SSESGAVRIE C
Arabidopsis Description
At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.