Factsheet for Bra016612.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96781	Canola	plastid	83.35	86.31
AT1G17220.1	Thale cress	plastid	79.73	79.34
Os05t0575300-02	Rice	cytosol	41.92	76.57
Bra025989.1-P	Field mustard	plastid	74.14	73.85
KRH13635	Soybean	nucleus	62.68	63.05
VIT_19s0027g00130.t01	Wine grape	plastid	61.21	61.58
PGSC0003DMT400079833	Potato	plastid	60.33	61.17
Solyc07g056020.2.1	Tomato	nucleus, plastid	60.14	60.79
KRH43837	Soybean	nucleus, plastid	59.65	60.3
GSMUA_Achr3P23270_001	Banana	plastid	56.22	59.05
GSMUA_Achr8P07210_001	Banana	plastid	55.73	58.72
KXG22198	Sorghum	plastid	51.13	53.54
HORVU7Hr1G060530.1	Barley	plastid	49.66	52.65
TraesCS7D01G288700.1	Wheat	plastid	49.46	52.44
TraesCS7B01G183700.2	Wheat	plastid	32.32	48.67
TraesCS7A01G287900.1	Wheat	plastid	32.22	48.53
Zm00001d017588_P001	Maize	plastid	19.2	46.56
Bra033153.1-P	Field mustard	cytosol	22.33	32.95
Bra000738.1-P	Field mustard	cytosol	23.02	22.93
Bra016430.1-P	Field mustard	cytosol	14.89	14.69
Bra031113.1-P	Field mustard	cytosol	5.97	13.44
Bra031112.1-P	Field mustard	cytosol	3.53	12.24
Bra008279.1-P	Field mustard	nucleus	14.59	11.75

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra016612	EnsemblPlants:Bra016612.1
EnsemblPlants:Bra016612.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925
UniProt:M4DJD4	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PRINTS:PR00315
ScanProsite:PS01176	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF5	SUPFAM:SSF50447	SUPFAM:SSF52156
SUPFAM:SSF52540	SignalP:SignalP-noTM	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2
InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf	UniParc:UPI00025456C6
SEG:seg	:	:	:	:	:

Description

AT1G17220 (E=0.0) FUG1 | FUG1 (fu-gaeri1); translation initiation factor

Coordinates

chrA08:-:19283867..19288667

Molecular Weight (calculated)

109109.0 Da

IEP (calculated)

6.483

GRAVY (calculated)

-0.295

Length

1021 amino acids

Sequence
(BLAST)

0001: MPSMLVLVGT MPSLASLVSP GGGGGPSVSS YASYALVKRV SLPRRSVKGA KKWLCRYSVS SSATTSTTDF IAESNSAVSI DSNSFKASIE GDESDIVLKQ
0101: APKPVLKPPV ARVERGLGVS SAPWNKDISN GGKFDGEEER SKVIESLGEV LDKAERLEIP KPVSKEGGEG FKPSQPSGSS SNSKGDGFGT RKTKTMKSVW
0201: RKGDAVAAVQ KVVKESPKID NKGMQVDAKS GTQLSPPQQP LRAQPQLQGK PMVAQPPVKK PILKDHGMAT RPSGPILKDV GMASKPSVSE EVDSSSQSKE
0301: RKPILVDKFA SKKKGVDPVA SQTVLAPTKP GKGPPSNKLR FEQRNKKNAS ANPRRRMAAE DDADEDASEL NVSIPGKGRK GRKWSKASRK AVRLQAARDA
0401: APVKAEILEV EEEGMSIEDL AYNLAIGEGD ILGYLYSKGI RPDGVQTLDR EMVRMICRDY DVEVLDADSV QVEEMAKKKE IFDEEDLDKL EDRPPVITIM
0501: GHVDHGKTTL LDYIRKSKVA ASEAGGITQG IGAYKVSVPV DGKLQSCVFL DTPGHEAFGA MRARGARVTD IAIIVVAADD GIRPQTNEAI AHAKAAGVPI
0601: VIAINKIDKD GASPERVMQE LSSIGLMPED WGGDVPMVQI SALKGENIDD LLETVMLVAE LQELKANPHR NAKGIVIEAG LDKAKGPFAT FIVQKGTLRK
0701: GDVVVCGEAF GKVRALFDHS GERVDEAGPS IPVQVIGLNN VPIAGDEFEI VSSLDVAREM AEARAVSLRD ERISAKAGDG KVTLSSLASA VSAKKMSGLD
0801: LHQLNIILKV DVQGSIEAVK QALQVLPQEN VTLKFLLQAT GDVSNSDVDL ASASEAIIFG FNVKASGSVK KAAENKGVEI RLYRVIYELI DDVRNAMEGL
0901: LESVEEQIPI GSAEVRATFS SGSGRVAGCM VNEGKFVKDC GIRVIRKGKT VHVGVLDSLK RVKENVKEVS AGLECGIGMD DYDDWIEGDT IEAFNAVQKR
1001: RTLEEASASM SAAIEEAGVE L

Best Arabidopsis Sequence Match ( AT1G17220.1 )
(BLAST)

0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV

Arabidopsis Description

FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.