Factsheet for TraesCS7A01G287900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G183700.2	Wheat	plastid	90.12	90.12
Zm00001d017588_P001	Maize	plastid	43.36	69.83
HORVU7Hr1G060530.1	Barley	plastid	92.63	65.21
TraesCS7D01G288700.1	Wheat	plastid	91.3	64.28
KXG22198	Sorghum	plastid	68.44	47.59
Os05t0575300-02	Rice	cytosol	35.99	43.65
CDY26262	Canola	cytosol	37.17	38.01
VIT_19s0027g00130.t01	Wine grape	plastid	54.28	36.26
GSMUA_Achr3P23270_001	Banana	plastid	51.33	35.8
GSMUA_Achr8P07210_001	Banana	plastid	50.74	35.5
CDY48480	Canola	plastid	48.53	34.16
PGSC0003DMT400079833	Potato	plastid	50.3	33.86
Solyc07g056020.2.1	Tomato	nucleus, plastid	50.3	33.76
CDX83919	Canola	plastid	47.64	33.44
Bra025989.1-P	Field mustard	plastid	50.44	33.37
KRH13635	Soybean	nucleus	49.56	33.1
CDX96781	Canola	plastid	47.94	32.96
KRH43837	Soybean	nucleus, plastid	48.67	32.67
AT1G17220.1	Thale cress	plastid	49.12	32.46
Bra016612.1-P	Field mustard	plastid	48.53	32.22
TraesCS1A01G331200.1	Wheat	mitochondrion	21.98	20.93
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	14.45	11.82
TraesCS1A01G438600.2	Wheat	nucleus	17.11	8.99

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.300	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412
GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR43381
PANTHER:PTHR43381:SF5	SUPFAM:SSF50447	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like
InterPro:TIF_IF2	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	EnsemblPlantsGene:TraesCS7A01G287900	EnsemblPlants:TraesCS7A01G287900.1	InterPro:Transl_B-barrel_sf
TIGR:cd01887	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:345224578..345228495

Molecular Weight (calculated)

73701.6 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.397

Length

678 amino acids

Sequence
(BLAST)

001: MASPASVTNL GSNGRPGPLP TAAVRRGHLV SRISFTGFDG VRRWPCAPGR LCRCMVITNL IDEKGAQFSS RVSVNVKADD DSDLLSKPPQ RPVRLNGPPA
101: SMDTATTSAP ARKPAGVTLQ DREKVRESLD EVLEKAEKLE ASSSRNVDGE NHALRQNDVA KPNSSVPIVV EEGSNSKRTK TLKSVWRKGN PVPTVHKVIR
201: DRPRTETRDQ SISAAEPSVS SPSKLAPHLQ TRPSVAPPPR RPVKADTSKE KKGPILIDKF ASKRPMVDPA VAEALVDPVK PVRGPPAKAK DNRHKKIITP
301: AGPRRRMSND DRSVDDDAPV RKGRRWSKAK RRAARLEALE AEEPVRVEIL EVGEEGMDID ELAYQLAVGE SEILRFLSVR GAMLDNVQTL DKDLVKMVCM
401: EYEVEVLESV PVRVEEMAKK NEFLDEEDLD KLEVRPPIVT IMGHVDHGKT TLLDYIRKSK VVASEAGGIT QGIGAYQVLV PVDGNPQACV FLDTPGHEAF
501: GAMRARGAKV TDICIIVVSA DDGVQPQTNE AIAHAKAARV PVVIAINKVD KEGANPERVM QELSQIGLMP EMWGGDTPMV QISALKGENV DELLETVMLV
601: AELLELKANP HRNAKGTVIE ACLDKAKGPL ATLVVQNGTL NKGDILVCGE AFGKIRAMYD DRGSLVDQAA PSNAVQMW

Best Arabidopsis Sequence Match ( AT1G17220.1 )
(BLAST)

0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV

Arabidopsis Description

FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.