Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0575300-02 | Rice | cytosol | 59.28 | 70.3 |
| CDY48480 | Canola | plastid | 94.87 | 65.32 |
| CDX96781 | Canola | plastid | 92.16 | 61.97 |
| Bra025989.1-P | Field mustard | plastid | 93.67 | 60.59 |
| CDX83919 | Canola | plastid | 87.18 | 59.83 |
| AT1G17220.1 | Thale cress | plastid | 91.25 | 58.97 |
| PGSC0003DMT400079833 | Potato | plastid | 77.68 | 51.14 |
| VIT_19s0027g00130.t01 | Wine grape | plastid | 77.98 | 50.94 |
| Solyc07g056020.2.1 | Tomato | nucleus, plastid | 77.53 | 50.89 |
| KRH43837 | Soybean | nucleus, plastid | 77.38 | 50.79 |
| KRH13635 | Soybean | nucleus | 77.07 | 50.34 |
| GSMUA_Achr3P23270_001 | Banana | plastid | 69.83 | 47.63 |
| TraesCS7D01G288700.1 | Wheat | plastid | 68.63 | 47.25 |
| KXG22198 | Sorghum | plastid | 69.38 | 47.18 |
| HORVU7Hr1G060530.1 | Barley | plastid | 68.48 | 47.14 |
| GSMUA_Achr8P07210_001 | Banana | plastid | 66.82 | 45.72 |
| TraesCS7A01G287900.1 | Wheat | plastid | 38.01 | 37.17 |
| TraesCS7B01G183700.2 | Wheat | plastid | 37.25 | 36.43 |
| Zm00001d017588_P001 | Maize | plastid | 22.47 | 35.39 |
| CDX94227 | Canola | mitochondrion, plastid | 25.64 | 30.52 |
| CDY25276 | Canola | mitochondrion | 33.18 | 29.89 |
| CDY05134 | Canola | mitochondrion | 32.58 | 29.47 |
| CDX90791 | Canola | mitochondrion | 32.13 | 29.06 |
| CDY49760 | Canola | plastid | 11.16 | 16.97 |
| CDY33673 | Canola | cytosol | 20.51 | 13.49 |
| CDX81961 | Canola | cytosol | 5.88 | 13.22 |
| CDX81960 | Canola | cytosol | 5.43 | 12.9 |
| CDX96600 | Canola | cytosol | 19.46 | 12.89 |
| CDY13882 | Canola | cytosol | 5.43 | 12.24 |
| CDY13881 | Canola | cytosol | 8.14 | 11.89 |
| CDY45947 | Canola | nucleus | 19.76 | 11.42 |
| CDY20385 | Canola | nucleus | 19.91 | 10.85 |
Protein Annotations
| MapMan:17.7.3.3 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | GO:A0A078GM48 | UniProt:A0A078GM48 |
| EnsemblPlants:CDY26262 | ProteinID:CDY26262 | ProteinID:CDY26262.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00034936001 | InterPro:IPR000795 | InterPro:IPR036925 | HAMAP:MF_00100_B | InterPro:P-loop_NTPase | PFAM:PF00009 |
| PFAM:PF11987 | PRINTS:PR00315 | ScanProsite:PS01176 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF5 |
| SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TF_IF2_bacterial-like |
| InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | TIGRFAMs:TIGR00487 | InterPro:Transl_B-barrel_sf |
| UniParc:UPI0004EE5A90 | SEG:seg | : | : | : | : |
Description
BnaA06g11550DBnaA06g11550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM48]
Coordinates
chrLK032186:-:558051..561813
Molecular Weight (calculated)
70961.9 Da
IEP (calculated)
4.608
GRAVY (calculated)
-0.113
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQDDADED ASELNVSIPG SGRKGRKWSK ASRKAARLQA ARDAAPVKAE ILEVEEEGMS IEDLAYNLAI GEGDILGYLY SKGIRPDGVQ TLDREMVRMI
101: CRDYDVEVLD ADSVQVEEMA KKKEIFDEED LDKLEDRPPV ITIMGHVDHG KTTLLDYIRK SKVAASEAGG ITQGIGAYKV SVPVDGKVQS CVFLDTPGHE
201: AFGAMRARGA RVTDIAIVVV AADDGIRPQT NEAIAHAKAA GVPIVIAINK IDKDGASPER VMQELSSIGL MPEDWGGDVP MVQISALKGE NIDDLLETVM
301: LVAELQELKA NPHRNAKGIV IEAGLDKAKG PFATFIVQKG TLKRGDVVVC GEAFGKVRAL FDHSGERVDE AGPSIPVQVI GLNNVPIAGD EFEIVSSLDV
401: AREMAEARAV SLRDERISAK AGDGKVTLSS LASAVSAKKM SGLDLHQLNI ILKVDVQGSI EAVRQALQVL PQENVTLKFL LQATGDVSNS DVDLASASEA
501: IIFGFNVKAS GSVKKAAENK GVEIRLYRVI YELIDDVRNA MEGLLESVEE QIPIGSAEVR ATFSSGSGRV AGCMVNEGKF VKDCGIKVIR KGKTVHVGVL
601: DSLKRVKENV KEVGAGLECG IGMDDYDDWI EGDTIEAFNA VQKRRTLEEA SASMSAAIEE AGV
101: CRDYDVEVLD ADSVQVEEMA KKKEIFDEED LDKLEDRPPV ITIMGHVDHG KTTLLDYIRK SKVAASEAGG ITQGIGAYKV SVPVDGKVQS CVFLDTPGHE
201: AFGAMRARGA RVTDIAIVVV AADDGIRPQT NEAIAHAKAA GVPIVIAINK IDKDGASPER VMQELSSIGL MPEDWGGDVP MVQISALKGE NIDDLLETVM
301: LVAELQELKA NPHRNAKGIV IEAGLDKAKG PFATFIVQKG TLKRGDVVVC GEAFGKVRAL FDHSGERVDE AGPSIPVQVI GLNNVPIAGD EFEIVSSLDV
401: AREMAEARAV SLRDERISAK AGDGKVTLSS LASAVSAKKM SGLDLHQLNI ILKVDVQGSI EAVRQALQVL PQENVTLKFL LQATGDVSNS DVDLASASEA
501: IIFGFNVKAS GSVKKAAENK GVEIRLYRVI YELIDDVRNA MEGLLESVEE QIPIGSAEVR ATFSSGSGRV AGCMVNEGKF VKDCGIKVIR KGKTVHVGVL
601: DSLKRVKENV KEVGAGLECG IGMDDYDDWI EGDTIEAFNA VQKRRTLEEA SASMSAAIEE AGV
0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
Arabidopsis Description
FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.