Factsheet for Bra025989.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26262	Canola	cytosol	60.59	93.67
AT1G17220.1	Thale cress	plastid	76.59	76.51
Bra016612.1-P	Field mustard	plastid	73.85	74.14
Os05t0575300-02	Rice	cytosol	39.32	72.09
VIT_19s0027g00130.t01	Wine grape	plastid	64.29	64.93
KRH43837	Soybean	nucleus, plastid	62.24	63.17
KRH13635	Soybean	nucleus	62.34	62.96
PGSC0003DMT400079833	Potato	plastid	61.76	62.86
Solyc07g056020.2.1	Tomato	nucleus, plastid	61.85	62.77
GSMUA_Achr3P23270_001	Banana	plastid	53.95	56.89
HORVU7Hr1G060530.1	Barley	plastid	52.88	56.28
GSMUA_Achr8P07210_001	Banana	plastid	53.17	56.24
TraesCS7D01G288700.1	Wheat	plastid	52.68	56.07
KXG22198	Sorghum	plastid	52.59	55.28
TraesCS7A01G287900.1	Wheat	plastid	33.37	50.44
TraesCS7B01G183700.2	Wheat	plastid	32.2	48.67
Zm00001d017588_P001	Maize	plastid	19.41	47.27
Bra033153.1-P	Field mustard	cytosol	22.34	33.09
Bra000738.1-P	Field mustard	cytosol	22.83	22.83
Bra016430.1-P	Field mustard	cytosol	15.51	15.36
Bra031113.1-P	Field mustard	cytosol	5.95	13.44
Bra031112.1-P	Field mustard	cytosol	3.51	12.24
Bra008279.1-P	Field mustard	nucleus	15.12	12.22

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra025989	EnsemblPlants:Bra025989.1
EnsemblPlants:Bra025989.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925
UniProt:M4EB30	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PRINTS:PR00315
ScanProsite:PS01176	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF5	SUPFAM:SSF50447	SUPFAM:SSF52156
SUPFAM:SSF52540	SignalP:SignalP-noTM	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2
InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf	UniParc:UPI000253F2F2
SEG:seg	:	:	:	:	:

Description

AT1G17220 (E=0.0) FUG1 | FUG1 (fu-gaeri1); translation initiation factor

Coordinates

chrA06:+:6613934..6618513

Molecular Weight (calculated)

109201.0 Da

IEP (calculated)

6.814

GRAVY (calculated)

-0.317

Length

1025 amino acids

Sequence
(BLAST)

0001: MTSMLVLVGT VPSLVSLVSP GGAGASVSGT SSSYGSYALV KRVSLSRRSV KGGSKRWLCR YSVSSSATTS TTDFIAEANS NSNSVSSIDS NSFKASKEGD
0101: DSSEIVLKQA PKPVLKPPVA RVEKGGSGAS SSAPWSKELS NGAKFDGEDE RNKVIESLGE VLDKAESLEI PKPSNKEGEP SQPRANTSDS KNGTFASGGE
0201: TRKTKTMKSV WRKGDAVAAV EKVVKQEPKI ESRGPPQPPL RPQPPLRPQP QLQGRPMVAP PPVKKPILKD LGMSSKPSGP ILKDVGMATK PPVSEEVVDS
0301: SNKSKERKPI LVDKFASKKK SADPAASQAV LAPTKPGKGP PSSKFRVEHR NKRNASANPR RRMAAQDDAD EGASELNVSI PGSGRKGRKW SKASRKAARL
0401: QAARDAAPVK AEILEVEEEG MSIEDLAYNL AIGEGDILGY LYSKGIRPDG VQTLDREMVR MICRDYDVEV LDADSVQVEE MAKKKEIFDE EDLDKLEDRP
0501: PVITIMGHVD HGKTTLLDYI RKSKVAASEA GGITQGIGAY KVSVPVDGKV QSCVFLDTPG HEAFGAMRAR GARVTDIAIV VVAADDGIRP QTNEAIAHAK
0601: AAGVPIVIAI NKIDKDGASP ERVMQELSSI GLMPEDWGGD VPMVQISALK GENIDDLLET VMLVAELQEL KANPHRNAKG IVIEAGLDKA KGPFATFIVQ
0701: KGTLKRGDVV VCGEAFGKVR ALFDHSGERV DEAGPSIPVQ VIGLNNVPIA GDEFEIVSSL DVAREMAEAR AVSLRDERIS AKAGDGKVTL SSLASAVSAK
0801: KMSGLDLHQL NIILKVDVQG SIEAVRQALQ VLPQENVTLK FLLQATGDVS NSDVDLASAS EAIIFGFNVK ASGSVKKAAE NKGVEIRLYR VIYELIDDVR
0901: NAMEGLLESV EEQIPIGSAE VRATFSSGSG RVAGCMVNEG KFVKDCGIKV IRKGKTVHVG VLDSLKRVKE NVKEVGAGLE CGIGMDDYDD WIEGDTIEAF
1001: NAVQKRRTLE EASASMSAAI EEAGV

Best Arabidopsis Sequence Match ( AT1G17220.1 )
(BLAST)

0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV

Arabidopsis Description

FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.