Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26262 | Canola | cytosol | 70.3 | 59.28 |
| KXG22198 | Sorghum | plastid | 85.33 | 48.92 |
| TraesCS7D01G288700.1 | Wheat | plastid | 84.26 | 48.91 |
| HORVU7Hr1G060530.1 | Barley | plastid | 84.08 | 48.81 |
| GSMUA_Achr8P07210_001 | Banana | plastid | 78.53 | 45.3 |
| GSMUA_Achr3P23270_001 | Banana | plastid | 78.53 | 45.16 |
| CDX83919 | Canola | plastid | 75.67 | 43.79 |
| Bra016612.1-P | Field mustard | plastid | 76.57 | 41.92 |
| CDY48480 | Canola | plastid | 71.2 | 41.33 |
| CDX96781 | Canola | plastid | 72.27 | 40.97 |
| KRH13635 | Soybean | nucleus | 72.09 | 39.7 |
| VIT_19s0027g00130.t01 | Wine grape | plastid | 71.56 | 39.41 |
| Bra025989.1-P | Field mustard | plastid | 72.09 | 39.32 |
| AT1G17220.1 | Thale cress | plastid | 71.91 | 39.18 |
| PGSC0003DMT400079833 | Potato | plastid | 70.3 | 39.03 |
| KRH43837 | Soybean | nucleus, plastid | 70.3 | 38.91 |
| Solyc07g056020.2.1 | Tomato | nucleus, plastid | 70.3 | 38.91 |
| TraesCS7B01G183700.2 | Wheat | plastid | 43.65 | 35.99 |
| TraesCS7A01G287900.1 | Wheat | plastid | 43.65 | 35.99 |
| Zm00001d017588_P001 | Maize | plastid | 24.33 | 32.3 |
| Os09t0515500-01 | Rice | mitochondrion | 36.85 | 28.77 |
| Os12t0503200-01 | Rice | cytosol, nucleus, plastid | 8.05 | 11.51 |
| Os01t0583900-00 | Rice | plastid | 9.12 | 10.81 |
| Os01t0583700-00 | Rice | vacuole | 7.69 | 10.34 |
| Os05t0592600-01 | Rice | nucleus | 21.29 | 9.86 |
Protein Annotations
| MapMan:17.7.3.3 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ProteinID:BAF18310.1 | ProteinID:BAS95472.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 | HAMAP:MF_00100_B |
| EnsemblPlantsGene:Os05g0575300 | EnsemblPlants:Os05t0575300-02 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF11987 | PRINTS:PR00315 |
| ScanProsite:PS01176 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF5 | UniProt:Q0DFR3 | SUPFAM:SSF50447 |
| SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TF_IF2_bacterial-like | InterPro:TIF_IF2 |
| InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | TIGRFAMs:TIGR00487 | InterPro:Transl_B-barrel_sf | UniParc:UPI0000E125FD |
| SEG:seg | : | : | : | : | : |
Description
Similar to Translation initiation factor IF-2. (Os05t0575300-01);Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp). (Os05t0575300-02)
Coordinates
chr5:+:28656123..28661349
Molecular Weight (calculated)
59596.6 Da
IEP (calculated)
4.723
GRAVY (calculated)
-0.027
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: EVLESGPVKV EEMAKKKEFL DEEDLDKLED RPPIVTIMGH VDHGKTTLLD YIRKSKVVAS EAGGITQGIG AYQVIVQVDG NPHACVFLDT PGHEAFGAMR
101: ARGARVTDIC IIVVSADDGV RPQTNEAIAH AKAAGVPIVI AINKIDKEGA NAERVMQELS QIGLMPEAWG GDIPMIQISA LNGEGVDELL ETIILVAELQ
201: ELKANPHRNA KGTVIEACLD KAKGSLATLV VQNGTLNKGD IVVCGEAFGK IRAMYDDGGK LIDKAGPSNA VQVIGLNNVP LAGDEFESVD NLDVARERAN
301: ARAEALRIER ISSKAGEGKV TLSSIAASVS SGKQVGIDTH ELNIILKVDF QGSVEAIRQA IQVLPQENVS LRFLLQAPGD VSVSDVDLAV ASEGIIFGFN
401: VKAPGSVKSY AKKKSVEIRL YKVIYDLIDD LRNAMEGLLE LAEEEVPIGS AKVRAVFSSG SGKVAGCMIT TGKVVHDCNV RVLRKGKEVY MGTLDSLRRV
501: KETVKEVGAG LECGIGVDDF DEWEEGDVVE AFNTVKKTRT LEEASASVTA ALKDAGVQL
101: ARGARVTDIC IIVVSADDGV RPQTNEAIAH AKAAGVPIVI AINKIDKEGA NAERVMQELS QIGLMPEAWG GDIPMIQISA LNGEGVDELL ETIILVAELQ
201: ELKANPHRNA KGTVIEACLD KAKGSLATLV VQNGTLNKGD IVVCGEAFGK IRAMYDDGGK LIDKAGPSNA VQVIGLNNVP LAGDEFESVD NLDVARERAN
301: ARAEALRIER ISSKAGEGKV TLSSIAASVS SGKQVGIDTH ELNIILKVDF QGSVEAIRQA IQVLPQENVS LRFLLQAPGD VSVSDVDLAV ASEGIIFGFN
401: VKAPGSVKSY AKKKSVEIRL YKVIYDLIDD LRNAMEGLLE LAEEEVPIGS AKVRAVFSSG SGKVAGCMIT TGKVVHDCNV RVLRKGKEVY MGTLDSLRRV
501: KETVKEVGAG LECGIGVDDF DEWEEGDVVE AFNTVKKTRT LEEASASVTA ALKDAGVQL
0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
Arabidopsis Description
FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.