Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26035336
plastid: 27992503 |
msms PMID:
26035336
doi
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 4.06 | 76.56 |
| PGSC0003DMT400029834 | Potato | cytosol | 3.98 | 75.0 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 77.22 | 72.19 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 53.6 | 72.13 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 76.39 | 71.53 |
| TraesCS1D01G446400.1 | Wheat | golgi | 76.22 | 70.99 |
| KXG22680 | Sorghum | nucleus | 75.81 | 70.77 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 75.81 | 70.38 |
| Zm00001d009749_P001 | Maize | nucleus | 74.07 | 69.14 |
| Solyc03g058380.2.1 | Tomato | nucleus | 42.09 | 66.75 |
| PGSC0003DMT400071616 | Potato | cytosol | 38.28 | 65.91 |
| AT2G27700.2 | Thale cress | cytosol | 25.77 | 64.79 |
| CDY49760 | Canola | plastid | 22.29 | 61.7 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 71.09 | 61.11 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.04 | 59.44 |
| CDY45947 | Canola | nucleus | 53.6 | 56.41 |
| Solyc06g054400.2.1 | Tomato | nucleus | 51.04 | 53.99 |
| CDY33673 | Canola | cytosol | 44.57 | 53.37 |
| CDX96600 | Canola | cytosol | 44.24 | 53.35 |
| Bra008279.1-P | Field mustard | nucleus | 55.51 | 52.84 |
| CDY20385 | Canola | nucleus | 53.27 | 52.83 |
| Bra016430.1-P | Field mustard | cytosol | 44.74 | 52.17 |
| AT1G76810.1 | Thale cress | nucleus | 54.68 | 51.0 |
| Solyc03g058350.2.1 | Tomato | nucleus | 47.47 | 49.57 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 54.76 | 48.89 |
| KRG91641 | Soybean | nucleus | 54.76 | 48.78 |
| AT1G76720.2 | Thale cress | cytosol | 48.63 | 47.96 |
| AT1G21160.1 | Thale cress | cytosol | 43.33 | 47.89 |
| KRG88874 | Soybean | cytosol | 15.33 | 47.8 |
| KRH35157 | Soybean | nucleus | 52.94 | 47.54 |
| PGSC0003DMT400079119 | Potato | nucleus | 51.86 | 46.82 |
| PGSC0003DMT400013995 | Potato | nucleus | 49.79 | 46.45 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 10.11 | 44.2 |
| CDX81961 | Canola | cytosol | 9.11 | 37.29 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 54.18 | 36.03 |
| CDX81960 | Canola | cytosol | 7.95 | 34.41 |
| CDY13882 | Canola | cytosol | 7.95 | 32.65 |
| Bra031112.1-P | Field mustard | cytosol | 7.95 | 32.65 |
| Bra031113.1-P | Field mustard | cytosol | 10.44 | 27.75 |
| CDY13881 | Canola | cytosol | 10.36 | 27.53 |
| Os05t0575300-02 | Rice | cytosol | 9.86 | 21.29 |
| Os09t0515500-01 | Rice | mitochondrion | 10.52 | 17.74 |
| Os12t0503200-01 | Rice | cytosol, nucleus, plastid | 5.22 | 16.11 |
| Os01t0583900-00 | Rice | plastid | 5.47 | 13.98 |
| Os01t0583700-00 | Rice | vacuole | 4.06 | 11.78 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ProteinID:BAF18411.1 | ProteinID:BAS95642.1 |
| ncoils:Coil | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 | EnsemblPlantsGene:Os05g0592600 | EnsemblPlants:Os05t0592600-01 |
| InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 | PFscan:PS51722 |
| PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | UniProt:Q0DFG2 | SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 |
| InterPro:Transl_B-barrel_sf | UniParc:UPI0000E12620 | SEG:seg | : | : | : |
Description
Translation initiation factor 2 related domain containing protein. (Os05t0592600-01);Hypothetical conserved gene. (Os05t0592600-02);Hypothetical conserved gene. (Os05t0592600-03)
Coordinates
chr5:-:29528780..29534681
Molecular Weight (calculated)
134585.0 Da
IEP (calculated)
4.906
GRAVY (calculated)
-0.813
Length
1207 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKNVAID DDEYSFDALA ADEDQGEDDD EAPAPAPAPV EPDAAAKSDA EDDDLDFDFS KAKKKKKKKD KGARPVPLEH DDLDLDKPAP PPPAAAADEA
0101: DDDEAAAAAA SKKPQKKKKK KGGFTVDNED IDKLLAEIDD TSPPTEEAEP VEEVPAPDAD DALGKKSKKK KKKGGFTVDD EDVDKILAEF EDQPPPVDDP
0201: EPEPEAVKDV GNVAASTSVD DAEGKKSKKK KKKSGRTAQE EEDLDKLLAE LGEGPTPAEK EKEVLPQAPP AAAMVKEDTE TAEDGKAGEG EVESAAAKKK
0301: KKKKEKEKEK KAAAKEADAK KEEEKAVEAP KGKVDMKKLP KHVREMQEAL ARRQEAEERK KREEEERLRK EEEERLKKEE EERKAEEAKR RKKEREKEKL
0401: LKKKQEGKLL TGKQKEEAKR LEAMRRQFLE QSELQVADGA VPETKKRPIY DSKKKKGQQK TLETAKVVEE QPQEVNETIN DEEEYVLVDQ ESQLQVEESE
0501: KTEPDQDVEE LKPEEEEDED EWDAKSWDDI DVNLPKTSAF EEEEANPVAK KVAEPVQKQE NSKAQSTVAT VKKVANSNKG ETEDGESSSA NARRNRGASK
0601: KGPIKEDETK NGSDLRSPIC CILGHVDTGK TKLLDCIRRT NVQEGEAGGI TQQIGATYFP TENIRERTKE LKADATLKVP GLLVIDTPGH ESFSNLRSRG
0701: SSLCDIAILV VDIMHGLEPQ TIESLNLLKS RDAVFIVALN KVDRLYGWKK CTNAPIGKAL RQQNEDVKRE FNMRLTDIVT QFKMQGVNTA LYYKNKEMED
0801: TYNIVPTSAI SGEGIPDLLL LLVQWAQKTM EERLTFVDEV QCTVLEVKVV EGHGTTVDVV LVNGILHEGD QIVVCGMQGP IVTTVRALLT PHPMRELRVK
0901: GTYQHHKKIR AAQGVKISAQ GLEHAIAGTA LYVLKPDDDL DRLKDAVMEE MTRVRNRIDK SGEGVYVQAS TLGSLEALTE FLKSPAVNIP FCDFSIGPVH
1001: KKDVMKASVM LERKKEYATI LAFDVKVMPD ARDLAEESGV RIFVADIIYH LFDQFTAYIK NLREEKKKES AEEAVFPCVL KIMPNCVFNK KDPIVLGVDV
1101: LEGIAKVGTP LCIPTKEYID IGKIASIEIN HKQVDMATKG QKVAIKIIGS NPDEQQKSFG RHFDMEDELV SRITRRSIDL LKENYRDDLS MDDWKLVVKL
1201: KSILKIP
0101: DDDEAAAAAA SKKPQKKKKK KGGFTVDNED IDKLLAEIDD TSPPTEEAEP VEEVPAPDAD DALGKKSKKK KKKGGFTVDD EDVDKILAEF EDQPPPVDDP
0201: EPEPEAVKDV GNVAASTSVD DAEGKKSKKK KKKSGRTAQE EEDLDKLLAE LGEGPTPAEK EKEVLPQAPP AAAMVKEDTE TAEDGKAGEG EVESAAAKKK
0301: KKKKEKEKEK KAAAKEADAK KEEEKAVEAP KGKVDMKKLP KHVREMQEAL ARRQEAEERK KREEEERLRK EEEERLKKEE EERKAEEAKR RKKEREKEKL
0401: LKKKQEGKLL TGKQKEEAKR LEAMRRQFLE QSELQVADGA VPETKKRPIY DSKKKKGQQK TLETAKVVEE QPQEVNETIN DEEEYVLVDQ ESQLQVEESE
0501: KTEPDQDVEE LKPEEEEDED EWDAKSWDDI DVNLPKTSAF EEEEANPVAK KVAEPVQKQE NSKAQSTVAT VKKVANSNKG ETEDGESSSA NARRNRGASK
0601: KGPIKEDETK NGSDLRSPIC CILGHVDTGK TKLLDCIRRT NVQEGEAGGI TQQIGATYFP TENIRERTKE LKADATLKVP GLLVIDTPGH ESFSNLRSRG
0701: SSLCDIAILV VDIMHGLEPQ TIESLNLLKS RDAVFIVALN KVDRLYGWKK CTNAPIGKAL RQQNEDVKRE FNMRLTDIVT QFKMQGVNTA LYYKNKEMED
0801: TYNIVPTSAI SGEGIPDLLL LLVQWAQKTM EERLTFVDEV QCTVLEVKVV EGHGTTVDVV LVNGILHEGD QIVVCGMQGP IVTTVRALLT PHPMRELRVK
0901: GTYQHHKKIR AAQGVKISAQ GLEHAIAGTA LYVLKPDDDL DRLKDAVMEE MTRVRNRIDK SGEGVYVQAS TLGSLEALTE FLKSPAVNIP FCDFSIGPVH
1001: KKDVMKASVM LERKKEYATI LAFDVKVMPD ARDLAEESGV RIFVADIIYH LFDQFTAYIK NLREEKKKES AEEAVFPCVL KIMPNCVFNK KDPIVLGVDV
1101: LEGIAKVGTP LCIPTKEYID IGKIASIEIN HKQVDMATKG QKVAIKIIGS NPDEQQKSFG RHFDMEDELV SRITRRSIDL LKENYRDDLS MDDWKLVVKL
1201: KSILKIP
0001: MVICWKISEP MGRKKPSSSR GGDDEQPPAA SSLVGAESKK KAVQSDEEDK YSINTEEEKV VITGKKKSNK KVTQKHDDDD DFTEAVPENG FVGKKKKSKG
0101: KNRGGSVSFA LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSG KKTRSSKSSK KTTNKVALPD
0201: EEEGTMGDEE SLEITFSGKK KGSIVLASLG DDSVADETSQ AKTPDTKSVE VIETGKIKKK KKNKNKVART LEEEDDLDKL LAELGETPAA ERPASSTPEV
0301: EKVQAQPGPV APVENAGEKE GEKETVETAA AKKKKKKKEK DKEKKAAAAA TSSVEAKEEK QEESVTEPLQ PKKKDAKGKA AEKKIPKHVR EMQEALARRQ
0401: EAEERKKKEE EEKLRKEEEE RRRQEELEAQ AEEAKRKRKE KEKEKLLRKK LEGKLLTAKQ KTEAQKREAF KNQLLAAGRG LPVADDVGDA TSSKRPIYAN
0501: KKKPSRQKGN DTSVQVEDEV EPQENHAATL GEVGSEDTEK VDLLESANTG EKSGPADVAQ ENGVEEDDEW DAKSWDNVDL KIDDKEEEAQ PVVKKELKAH
0601: DSDHETEKPT AKPAGMSKLT TGAVKAISEV EDAATQTKRA KKGKCLAPSE FIKEGGENLR SIICCIMGHV DSGKTKLLDC IRGTNVQEGE AGGITQQIGA
0701: TYFPAKNIRE RTRELKADAK LKVPGLLVID TPGHESFTNL RSRGSSLCDL AILVVDIKHG LEPQTIESLN LLRMRNTEFI IALNKVDRLY GWKTCKNAPI
0801: VKAMKQQNKD VTNEFNIRLT DIITQFKEQG LNTEIYYKNK EMGETFSIVP TSAKSGEGVP DLLLWLVQWA QKTMVEKLTY VDEVQCTVLE VKVIEGHGTT
0901: IDVVLVNGEL HEGDQIVVCG LQGPIVTTIR ALLTPHPMKE LRVKGTYLHH KEIKAAQGIK ITAQGLEHAI AGTSLHVVGP DDDIEAMKES AMEDMESVLS
1001: RIDKSGEGVY VQTSTLGSLE ALLEFLKTPA VNIPVSEGYN EGWSDAREEK EYATILAFDV KVTTEARELA DEMGVKIFCA DIIYQLFNQF QVYIENIKEE
1101: KKKESAGEAV FPCVLQILPN CVFNKRDPII LGVKVHDGIL KIGTPICVPG REFTDIGRIA SIENNHKPVD YAEKGDEVAI KIVASNREEQ KMFGRHFDME
1201: DELVSHISRR SIDILKADYM VSQG
0101: KNRGGSVSFA LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSG KKTRSSKSSK KTTNKVALPD
0201: EEEGTMGDEE SLEITFSGKK KGSIVLASLG DDSVADETSQ AKTPDTKSVE VIETGKIKKK KKNKNKVART LEEEDDLDKL LAELGETPAA ERPASSTPEV
0301: EKVQAQPGPV APVENAGEKE GEKETVETAA AKKKKKKKEK DKEKKAAAAA TSSVEAKEEK QEESVTEPLQ PKKKDAKGKA AEKKIPKHVR EMQEALARRQ
0401: EAEERKKKEE EEKLRKEEEE RRRQEELEAQ AEEAKRKRKE KEKEKLLRKK LEGKLLTAKQ KTEAQKREAF KNQLLAAGRG LPVADDVGDA TSSKRPIYAN
0501: KKKPSRQKGN DTSVQVEDEV EPQENHAATL GEVGSEDTEK VDLLESANTG EKSGPADVAQ ENGVEEDDEW DAKSWDNVDL KIDDKEEEAQ PVVKKELKAH
0601: DSDHETEKPT AKPAGMSKLT TGAVKAISEV EDAATQTKRA KKGKCLAPSE FIKEGGENLR SIICCIMGHV DSGKTKLLDC IRGTNVQEGE AGGITQQIGA
0701: TYFPAKNIRE RTRELKADAK LKVPGLLVID TPGHESFTNL RSRGSSLCDL AILVVDIKHG LEPQTIESLN LLRMRNTEFI IALNKVDRLY GWKTCKNAPI
0801: VKAMKQQNKD VTNEFNIRLT DIITQFKEQG LNTEIYYKNK EMGETFSIVP TSAKSGEGVP DLLLWLVQWA QKTMVEKLTY VDEVQCTVLE VKVIEGHGTT
0901: IDVVLVNGEL HEGDQIVVCG LQGPIVTTIR ALLTPHPMKE LRVKGTYLHH KEIKAAQGIK ITAQGLEHAI AGTSLHVVGP DDDIEAMKES AMEDMESVLS
1001: RIDKSGEGVY VQTSTLGSLE ALLEFLKTPA VNIPVSEGYN EGWSDAREEK EYATILAFDV KVTTEARELA DEMGVKIFCA DIIYQLFNQF QVYIENIKEE
1101: KKKESAGEAV FPCVLQILPN CVFNKRDPII LGVKVHDGIL KIGTPICVPG REFTDIGRIA SIENNHKPVD YAEKGDEVAI KIVASNREEQ KMFGRHFDME
1201: DELVSHISRR SIDILKADYM VSQG
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.