Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 4.21 | 71.88 |
| PGSC0003DMT400029834 | Potato | cytosol | 4.12 | 70.31 |
| AT2G27700.2 | Thale cress | cytosol | 29.4 | 66.88 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.97 | 60.84 |
| PGSC0003DMT400071616 | Potato | cytosol | 38.64 | 60.2 |
| Solyc03g058380.2.1 | Tomato | nucleus | 40.93 | 58.74 |
| CDY33673 | Canola | cytosol | 52.47 | 56.85 |
| Bra016430.1-P | Field mustard | cytosol | 53.21 | 56.14 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 45.7 | 55.63 |
| CDX96600 | Canola | cytosol | 50.92 | 55.54 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 23.08 | 48.55 |
| AT1G76720.2 | Thale cress | cytosol | 52.56 | 46.9 |
| Solyc06g054400.2.1 | Tomato | nucleus | 48.26 | 46.19 |
| KRG88874 | Soybean | cytosol | 16.03 | 45.22 |
| AT1G76810.1 | Thale cress | nucleus | 53.57 | 45.21 |
| Os05t0592600-01 | Rice | nucleus | 47.89 | 43.33 |
| Solyc03g058350.2.1 | Tomato | nucleus | 45.05 | 42.56 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 52.11 | 42.09 |
| OQU79180 | Sorghum | nucleus | 32.88 | 41.79 |
| KRG91641 | Soybean | nucleus | 51.19 | 41.25 |
| TraesCS1D01G446400.1 | Wheat | golgi | 48.08 | 40.51 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 47.8 | 40.43 |
| Zm00001d009749_P001 | Maize | nucleus | 47.71 | 40.29 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 10.16 | 40.22 |
| KXG22680 | Sorghum | nucleus | 47.62 | 40.22 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 47.71 | 40.08 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 47.25 | 40.03 |
| KRH35157 | Soybean | nucleus | 49.27 | 40.03 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 29.95 | 39.45 |
| PGSC0003DMT400079119 | Potato | nucleus | 48.08 | 39.27 |
| PGSC0003DMT400013995 | Potato | nucleus | 45.97 | 38.79 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 47.07 | 36.61 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 44.6 | 26.83 |
| AT4G11160.2 | Thale cress | plastid | 13.1 | 19.25 |
| AT1G17220.1 | Thale cress | plastid | 13.92 | 14.81 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | EntrezGene:838712 | EMBL:AB493471 |
| ProteinID:AEE30071.1 | ArrayExpress:AT1G21160 | EnsemblPlantsGene:AT1G21160 | RefSeq:AT1G21160 | TAIR:AT1G21160 | RefSeq:AT1G21160-TAIR-G |
| EnsemblPlants:AT1G21160.1 | TAIR:AT1G21160.1 | UniProt:C0SUW8 | ncoils:Coil | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 | RefSeq:NP_173540.2 |
| InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00315 |
| PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 |
| InterPro:Transl_B-barrel_sf | UniParc:UPI0001505796 | SEG:seg | : | : | : |
Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW8]
Coordinates
chr1:-:7407931..7413295
Molecular Weight (calculated)
121126.0 Da
IEP (calculated)
7.324
GRAVY (calculated)
-0.620
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPRNSSAWG GGDGLPLISS MGGVESKNRC CVTDDDGSIG TKLCEKPKAE EIDFSARKKK LKSKKGGSVS FALLDVEDDK EEAEDGDDKN PSIRSDEVVG
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.