Factsheet for TraesCS7B01G382100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029834	Potato	cytosol	6.94	56.25
PGSC0003DMT400030470	Potato	cytosol	6.94	56.25
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	87.28	54.64
OQU79180	Sorghum	nucleus	69.75	42.14
CDY49760	Canola	plastid	33.53	39.91
PGSC0003DMT400071616	Potato	cytosol	52.41	38.8
PGSC0003DMT400033284	Potato	cytosol	10.6	38.46
AT2G27700.2	Thale cress	cytosol	35.45	38.33
Solyc03g058380.2.1	Tomato	nucleus	52.79	36.01
GSMUA_Achr5P09710_001	Banana	cytosol	55.11	31.88
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	15.8	29.71
KRG88874	Soybean	cytosol	21.97	29.46
CDX81961	Canola	cytosol	16.57	29.15
CDX81960	Canola	cytosol	15.22	28.32
CDY13882	Canola	cytosol	15.03	26.53
Bra031112.1-P	Field mustard	cytosol	15.03	26.53
CDY33673	Canola	cytosol	49.71	25.6
CDX96600	Canola	cytosol	48.17	24.98
Bra016430.1-P	Field mustard	cytosol	49.71	24.93
Solyc06g054400.2.1	Tomato	nucleus	53.37	24.28
CDY45947	Canola	nucleus	52.6	23.8
Solyc03g058350.2.1	Tomato	nucleus	52.99	23.79
AT1G21160.1	Thale cress	cytosol	48.55	23.08
CDY20385	Canola	nucleus	52.22	22.27
AT1G76810.1	Thale cress	nucleus	53.18	21.33
Bra008279.1-P	Field mustard	nucleus	52.02	21.29
Bra031113.1-P	Field mustard	cytosol	18.3	20.93
TraesCS1B01G472500.1	Wheat	nucleus	52.41	20.92
PGSC0003DMT400079119	Potato	nucleus	53.56	20.79
AT1G76720.2	Thale cress	cytosol	48.55	20.59
VIT_18s0076g00310.t01	Wine grape	nucleus	52.99	20.34
CDY13881	Canola	cytosol	17.73	20.26
KRH35157	Soybean	nucleus	51.83	20.01
KRG91641	Soybean	nucleus	52.22	20.0
PGSC0003DMT400013995	Potato	nucleus	44.51	17.85
GSMUA_Achr1P05220_001	Banana	nucleus	54.34	15.54
TraesCS1B01G345100.2	Wheat	mitochondrion	15.8	11.52
TraesCS7B01G183700.2	Wheat	plastid	8.67	6.64

Protein Annotations

MapMan:17.4.3.2	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795
InterPro:IPR036925	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381
PANTHER:PTHR43381:SF2	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:TIF_IF2
InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	EnsemblPlantsGene:TraesCS7B01G382100	EnsemblPlants:TraesCS7B01G382100.1	InterPro:Transl_B-barrel_sf	TIGR:cd03703
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:647758196..647762061

Molecular Weight (calculated)

57522.7 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.135

Length

519 amino acids

Sequence
(BLAST)

001: MRSRGLSMCD IAVVVVDITQ GLEKQTIESL HLLRRHNVSF IVALNKVDRL YGWKECTNAP IVEALKKQSD DVKSEYKWRL TKVVTEFKEN GFNTAPYYEN
101: NKKKKVVNIV PTSAESGEGV PDLLLLLVRW LPGIITDKLA YDDTVECTVL EVNEHKDLGT TVDVVLINGV LHQGDQVIVC TKQGPVTTII RDLLTPHPMK
201: ELKAKGAYKH HKEVRAAQGV KIVARGLQYT MAGTSLIVVK PGDDLRQAEA AAMTDENEKG TTTQEVSSIV TSKEGIYVQA SSVGTLEAII AHLKSSSVDI
301: PVYAWNLGPV YKQDVMKASA MLKRKEEYAV ILAFDVKVMP EASALAAESG LKIITADTVY RLVNIYTEHI KGLKEAKKMQ FAAEAVFPCT LKILPNRVYH
401: SKDPIVCDVE VVEGVVKVGT PICVFTQSKV HSLGRISSMQ TSNGNQIFSA RNGVVAIKIS GDSPQEKSRC YGRHFDSSNE LVSEISRRSI DVLKECFRDE
501: MSAENWQLIT RLKTQFKIA

Best Arabidopsis Sequence Match ( AT1G21160.1 )
(BLAST)

0001: MDPRNSSAWG GGDGLPLISS MGGVESKNRC CVTDDDGSIG TKLCEKPKAE EIDFSARKKK LKSKKGGSVS FALLDVEDDK EEAEDGDDKN PSIRSDEVVG
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.